C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: F-box and leucine-rich repeat protein 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000145693 Fbxl3-002 ENSMUSG00000022124 10090 - 14:103081034-103098999 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000145693
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000145693 3.036±0.00 6.550±0.00 12.342±0.57 7.154±0.76 4.315±1.90 6.229±2.30 1.911±0.11 4.097±0.00 4.907±2.97 8.851±0.00 6.630±3.37 10.762±4.75 9.142±3.17 1.956±0.42

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004PQ CIL_0004PQ_0003 CGP 14:103070216-103099566
CIL_00004B CIL_00004B_0002 CGP 14:103080239-103346814

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004842 IDA ubiquitin-protein transferase activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005654 TAS nucleoplasm
GO:0005829 IDA cytosol
GO:0016567 IEA protein ubiquitination
GO:0019005 ISS SCF ubiquitin ligase complex
GO:0031146 ISS SCF-dependent proteasomal ubiquitin-dependent protein catabolic process
GO:0031648 IMP protein destabilization
GO:0042752 IMP regulation of circadian rhythm
GO:0043153 IMP entrainment of circadian clock by photoperiod
GO:0043161 IMP proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0048511 IEA rhythmic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000355619 FBXL3-001 protein_coding Homo_sapiens 0 1962
ENST00000417323 FBXL3-002 protein_coding Homo_sapiens 0 647
ENST00000470210 FBXL3-005 processed_transcript Homo_sapiens 0 394
ENST00000472949 FBXL3-003 processed_transcript Homo_sapiens 4e-22 108
ENST00000477982 FBXL3-006 processed_transcript Homo_sapiens 0 329
ENST00000485797 FBXL3-004 processed_transcript Homo_sapiens 0 226

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