C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: putative homeodomain transcription factor 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000145727 Phtf1-004 ENSMUSG00000058388 10090 + 3:103968366-104024598 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonHeartLiverLungOvaryENSMUST00000145727
Transcript ID Colon Heart Liver Lung Ovary
ENSMUST00000145727 0.941±0.00 0.493±0.06 0.284±0.12 1.845±0.07 1.523±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000357783 PHTF1-002 protein_coding Homo_sapiens 0 2534
ENST00000369598 PHTF1-011 protein_coding Homo_sapiens 0 2259
ENST00000369600 PHTF1-010 protein_coding Homo_sapiens 0 2628
ENST00000369604 PHTF1-001 protein_coding Homo_sapiens 0 3225
ENST00000393357 PHTF1-201 protein_coding Homo_sapiens 0 3116
ENST00000412670 PHTF1-004 protein_coding Homo_sapiens 0 1236
ENST00000446739 PHTF1-006 protein_coding Homo_sapiens 0 472
ENST00000472612 PHTF1-007 processed_transcript Homo_sapiens 0 372
ENST00000474926 PHTF1-003 processed_transcript Homo_sapiens 0 2285
ENST00000481652 PHTF1-009 processed_transcript Homo_sapiens 0 610
ENST00000493212 PHTF1-005 processed_transcript Homo_sapiens 0 211

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