C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SRY (sex determining region Y)-box 13
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000145922 Sox13-004 ENSMUSG00000070643 10090 - 1:133383978-133385526 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; PlacentaENSMUST00000145922
Transcript ID Placenta
ENSMUST00000145922 3.460±1.62

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008W2 CIL_0008W2_0002 VISTA 1:133249313-133850886

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000272193 SOX13-004 processed_transcript Homo_sapiens 0 327
ENST00000367204 SOX13-002 protein_coding Homo_sapiens 0 327
ENST00000618875 SOX13-201 protein_coding Homo_sapiens 0 327

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