C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: glia maturation factor, beta
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000145958 Gmfb-002 ENSMUSG00000062014 10090 - 14:46814262-46819575 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; TestisENSMUST00000145958
Transcript ID Testis
ENSMUST00000145958 34.123±7.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008KQ CIL_0008KQ_0002 VISTA 14:46305651-46906520
CIL_00090Z CIL_00090Z_0002 VISTA 14:46310670-46911777
CIL_0000HV CIL_0000HV_0002 CGP 14:46775582-46822242
CIL_0000HK CIL_0000HK_0002 CGP 14:46808149-46854193

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003779 IEA actin binding
GO:0005622 IEA intracellular
GO:0007612 IMP learning
GO:0007626 IMP locomotory behavior

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000358056 GMFB-001 protein_coding Homo_sapiens 0 446
ENST00000467831 GMFBP1-001 processed_pseudogene Homo_sapiens 0 394
ENST00000553333 GMFB-004 protein_coding Homo_sapiens 0 431
ENST00000553566 GMFB-008 processed_transcript Homo_sapiens 0 268
ENST00000553952 GMFB-003 retained_intron Homo_sapiens 6e-34 148
ENST00000554163 GMFB-006 retained_intron Homo_sapiens 0 267
ENST00000554247 GMFB-005 nonsense_mediated_decay Homo_sapiens 5e-34 148
ENST00000554682 GMFB-007 retained_intron Homo_sapiens 0 226
ENST00000554908 GMFB-002 protein_coding Homo_sapiens 3e-36 159
ENST00000616146 GMFB-201 protein_coding Homo_sapiens 0 440

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