C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | splicing factor 1 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000146298  |
Sf1-005 |
ENSMUSG00000024949 |
10090 | + |
19:6363963-6368784  |
retained_intron |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0001YW | CIL_0001YW_0002 | CGP | 19:6363690-6398459 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| No GO terms available. | ||
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000227503
|
SF1-002 | protein_coding | Homo_sapiens | 0 | 283 |
|
ENST00000334944
|
SF1-001 | protein_coding | Homo_sapiens | 0 | 283 |
|
ENST00000377387
|
SF1-006 | protein_coding | Homo_sapiens | 1e-30 | 139 |
|
ENST00000377390
|
SF1-005 | protein_coding | Homo_sapiens | 0 | 283 |
|
ENST00000377394
|
SF1-004 | protein_coding | Homo_sapiens | 0 | 283 |
|
ENST00000413951
|
SF1-011 | nonsense_mediated_decay | Homo_sapiens | 3e-31 | 139 |
|
ENST00000432725
|
SF1-018 | protein_coding | Homo_sapiens | 2e-31 | 139 |
|
ENST00000433274
|
SF1-016 | protein_coding | Homo_sapiens | 1e-30 | 139 |
|
ENST00000448404
|
SF1-003 | nonsense_mediated_decay | Homo_sapiens | 0 | 287 |
|
ENST00000463343
|
SF1-007 | retained_intron | Homo_sapiens | 0 | 324 |
|
ENST00000482693
|
SF1-012 | retained_intron | Homo_sapiens | 0 | 331 |
