C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: somatostatin receptor 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000146390 Sstr2-002 ENSMUSG00000047904 10090 + 11:113619342-113626028 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyLiverLungOvaryPlacentaTestisENSMUST00000146390
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000146390 0.030±0.01 0.880±0.24 0.067±0.03 9.969±6.47 0.032±0.00 1.720±0.38 0.170±0.05 0.990±0.81 0.963±0.24 0.154±0.09 0.194±0.09 0.180±0.13

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00067E CIL_00067E_0002 CGP 11:112782224-113650079
CIL_00067F CIL_00067F_0002 CGP 11:113244853-113650079
CIL_0007R4 CIL_0007R4_0002 VISTA 11:113433041-114034346
CIL_000678 CIL_000678_0002 CGP 11:113619342-113667054

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004994 IDA somatostatin receptor activity
GO:0005515 IEA protein binding
GO:0005737 IEA cytoplasm
GO:0005886 IDA plasma membrane
GO:0006937 IEA regulation of muscle contraction
GO:0007186 IMP G-protein coupled receptor signaling pathway
GO:0007193 IDA adenylate cyclase-inhibiting G-protein coupled receptor signaling pathway
GO:0007218 IDA neuropeptide signaling pathway
GO:0007283 IEA spermatogenesis
GO:0016020 IDA membrane
GO:0016021 IEA integral component of membrane
GO:0021549 IEA cerebellum development
GO:0030165 IEA PDZ domain binding
GO:0030432 IEA peristalsis
GO:0030900 IEA forebrain development
GO:0042594 IEA response to starvation
GO:0071385 IEA cellular response to glucocorticoid stimulus
GO:0071392 IEA cellular response to estradiol stimulus

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000267377 SSTR1-002 protein_coding Homo_sapiens 0.00000000006 75
ENST00000357585 SSTR2-001 protein_coding Homo_sapiens 0 1384

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