C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | legumain | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000146499  |
Lgmn-003 |
ENSMUSG00000021190 |
10090 | - |
12:102400102-102406146  |
retained_intron |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_000536 | CIL_000536_0002 | CGP | 12:102283048-102439813 |
| CIL_000537 | CIL_000537_0002 | CGP | 12:102394084-102497902 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| No GO terms available. | ||
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000334869
|
LGMN-001 | protein_coding | Homo_sapiens | 0 | 492 |
|
ENST00000393218
|
LGMN-005 | protein_coding | Homo_sapiens | 0 | 492 |
|
ENST00000441282
|
LGMNP1-001 | processed_pseudogene | Homo_sapiens | 0 | 394 |
|
ENST00000555699
|
LGMN-004 | protein_coding | Homo_sapiens | 0 | 492 |
|
ENST00000556097
|
LGMN-019 | nonsense_mediated_decay | Homo_sapiens | 1e-27 | 128 |
|
ENST00000557434
|
LGMN-002 | protein_coding | Homo_sapiens | 0 | 492 |
|
ENST00000557609
|
LGMN-007 | nonsense_mediated_decay | Homo_sapiens | 0 | 350 |
|
ENST00000557725
|
LGMN-022 | retained_intron | Homo_sapiens | 7e-38 | 161 |
