C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: legumain
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000393218 LGMN-005 ENSG00000100600 9606 - 14:92703844-92748679 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastColonHeartLiverLungOvaryTestisENST00000393218
Transcript ID Breast Colon Heart Liver Lung Ovary Testis
ENST00000393218 4.333±0.00 8.534±0.00 1.079±0.00 4.131±0.00 2.525±0.00 8.349±4.06 6.923±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000536 CIL_000536_0001 CGP 14:92513774-92748702
CIL_000537 CIL_000537_0001 CGP 14:92703807-92839963

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002224 TAS toll-like receptor signaling pathway
GO:0003014 ISS renal system process
GO:0004197 ISS:IEA cysteine-type endopeptidase activity
GO:0005764 ISS lysosome
GO:0005770 IEA late endosome
GO:0006508 ISS:IEA proteolysis
GO:0008202 TAS steroid metabolic process
GO:0008233 IDA peptidase activity
GO:0010447 IEA response to acidic pH
GO:0019886 TAS antigen processing and presentation of exogenous peptide antigen via MHC class II
GO:0032801 ISS receptor catabolic process
GO:0040015 IEA negative regulation of multicellular organism growth
GO:0042359 TAS vitamin D metabolic process
GO:0043202 TAS lysosomal lumen
GO:0043524 IGI negative regulation of neuron apoptotic process
GO:0044281 TAS small molecule metabolic process
GO:0045087 TAS innate immune response
GO:0045177 IEA apical part of cell
GO:0051603 ISS proteolysis involved in cellular protein catabolic process
GO:0070062 IDA extracellular vesicular exosome
GO:1901185 ISS negative regulation of ERBB signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000021607 Lgmn-001 protein_coding Mus_musculus 0 1096
ENSMUST00000110020 Lgmn-002 protein_coding Mus_musculus 0 1096
ENSMUST00000146499 Lgmn-003 retained_intron Mus_musculus 0 492

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