C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: legumain
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000557609 LGMN-007 ENSG00000100600 9606 - 14:92703847-92748603 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryPlacentaTestisENST00000557609
Transcript ID Ovary Placenta Testis
ENST00000557609 28.834±0.00 172.243±0.00 6.862±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000536 CIL_000536_0001 CGP 14:92513774-92748702
CIL_000537 CIL_000537_0001 CGP 14:92703807-92839963

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004197 IEA cysteine-type endopeptidase activity
GO:0006508 IEA proteolysis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000021607 Lgmn-001 protein_coding Mus_musculus 0 752
ENSMUST00000110020 Lgmn-002 protein_coding Mus_musculus 0 752
ENSMUST00000146499 Lgmn-003 retained_intron Mus_musculus 0 350

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