C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: uridine phosphorylase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000146696 Upp1-004 ENSMUSG00000020407 10090 + 11:9133015-9136082 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastLiverMuscleOvaryENSMUST00000146696
Transcript ID Breast Liver Muscle Ovary
ENSMUST00000146696 1.194±0.15 0.335±0.00 0.074±0.02 1.302±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000S9 CIL_0000S9_0002 CGP 11:9048594-9136170
CIL_0000S4 CIL_0000S4_0002 CGP 11:9118103-9684259

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000331803 UPP1-001 protein_coding Homo_sapiens 0 551
ENST00000395560 UPP1-004 nonsense_mediated_decay Homo_sapiens 0 414
ENST00000395564 UPP1-003 protein_coding Homo_sapiens 0 551
ENST00000417464 UPP1-006 nonsense_mediated_decay Homo_sapiens 0 414
ENST00000444999 UPP1-012 nonsense_mediated_decay Homo_sapiens 0 305
ENST00000457596 UPP1-010 nonsense_mediated_decay Homo_sapiens 0 374
ENST00000482015 UPP1-005 processed_transcript Homo_sapiens 0 418
ENST00000495446 UPP1-008 retained_intron Homo_sapiens 0 418

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