C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: phosphatidic acid phosphatase type 2 domain containing 1B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000146762 Ppapdc1b-010 ENSMUSG00000031570 10090 + 8:25722958-25724448 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastOvaryENSMUST00000146762
Transcript ID Breast Ovary
ENSMUST00000146762 12.224±0.00 9.187±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008H7 CIL_0008H7_0002 VISTA 8:25139932-25741457
CIL_0008SM CIL_0008SM_0002 VISTA 8:25140188-25742103
CIL_0008NR CIL_0008NR_0002 VISTA 8:25243011-25845762

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000424479 PPAPDC1B-001 protein_coding Homo_sapiens 4e-30 137
ENST00000524616 PPAPDC1B-007 protein_coding Homo_sapiens 1e-30 137
ENST00000529359 PPAPDC1B-005 protein_coding Homo_sapiens 4e-30 137
ENST00000530432 PPAPDC1B-012 retained_intron Homo_sapiens 1e-30 137
ENST00000531109 PPAPDC1B-016 nonsense_mediated_decay Homo_sapiens 0.000000000000001 88
ENST00000531823 PPAPDC1B-015 protein_coding Homo_sapiens 1e-30 137
ENST00000534339 PPAPDC1B-006 protein_coding Homo_sapiens 1e-30 137

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