C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: low density lipoprotein receptor-related protein associated protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000147028 Lrpap1-005 ENSMUSG00000029103 10090 - 5:35097598-35105689 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainOvaryPlacentaTestisENSMUST00000147028
Transcript ID Brain Ovary Placenta Testis
ENSMUST00000147028 71.731±0.00 71.227±0.00 103.904±62.72 43.545±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001XD CIL_0001XD_0002 CGP 5:35056813-35105766

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000296325 LRPAP1-004 processed_transcript Homo_sapiens 0 303
ENST00000500728 LRPAP1-001 protein_coding Homo_sapiens 0 424
ENST00000509198 LRPAP1-002 retained_intron Homo_sapiens 1.4013e-45 187
ENST00000515119 LRPAP1-003 nonsense_mediated_decay Homo_sapiens 0 300

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