C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tRNA isopentenyltransferase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000147165 Trit1-002 ENSMUSG00000028653 10090 + 4:123016597-123054949 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000147165
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000147165 1.593±0.91 7.794±2.37 2.767±0.34 7.738±3.43 2.879±1.02 1.267±0.55 0.859±0.60 1.415±0.63 1.318±0.34 1.592±0.43 0.362±0.06 6.100±3.71 3.363±3.32 1.028±0.45

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000316891 TRIT1-001 protein_coding Homo_sapiens 0 1269
ENST00000372818 TRIT1-002 protein_coding Homo_sapiens 0 1136
ENST00000441669 TRIT1-003 protein_coding Homo_sapiens 0 756
ENST00000462243 TRIT1-010 retained_intron Homo_sapiens 0 483
ENST00000462797 TRIT1-004 nonsense_mediated_decay Homo_sapiens 0 1705
ENST00000465417 TRIT1-012 processed_transcript Homo_sapiens 2e-31 139
ENST00000467774 TRIT1-011 retained_intron Homo_sapiens 0 315
ENST00000469476 TRIT1-008 nonsense_mediated_decay Homo_sapiens 0 737
ENST00000486825 TRIT1-007 nonsense_mediated_decay Homo_sapiens 0 479
ENST00000489945 TRIT1-006 nonsense_mediated_decay Homo_sapiens 0 580
ENST00000491865 TRIT1-013 processed_transcript Homo_sapiens 3e-31 139
ENST00000492612 TRIT1-009 nonsense_mediated_decay Homo_sapiens 0 608
ENST00000495175 TRIT1-005 nonsense_mediated_decay Homo_sapiens 0 610
ENST00000537440 TRIT1-201 protein_coding Homo_sapiens 0 959

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