C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tRNA isopentenyltransferase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000316891 TRIT1-001 ENSG00000043514 9606 - 1:39841051-39883506 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartLiverLungMuscleOvaryPlacentaTestisENST00000316891
Transcript ID Adipose Adrenal Brain Breast Colon Heart Liver Lung Muscle Ovary Placenta Testis
ENST00000316891 1.985±0.00 3.887±0.00 1.653±1.08 1.139±0.00 0.489±0.00 1.924±1.32 0.837±0.17 1.054±0.00 0.801±0.00 4.291±0.89 3.677±1.57 4.288±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004JL CIL_0004JL_0002 CGP 1:39841022-39902256

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0004161 IEA dimethylallyltranstransferase activity
GO:0005524 IEA ATP binding
GO:0005575 ND cellular_component
GO:0005739 IEA mitochondrion
GO:0008033 IEA tRNA processing
GO:0008270 IEA zinc ion binding
GO:0009058 IEA biosynthetic process
GO:0016740 IEA transferase activity
GO:0046872 IEA metal ion binding
GO:0052381 TAS tRNA dimethylallyltransferase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000102649 Trit1-001 protein_coding Mus_musculus 0 1831
ENSMUST00000147165 Trit1-002 processed_transcript Mus_musculus 0 1269
ENSMUST00000141855 Trit1-003 processed_transcript Mus_musculus 0 475

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