C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tRNA isopentenyltransferase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000495175 TRIT1-005 ENSG00000043514 9606 - 1:39841626-39883511 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderColonHeartLungOvaryPlacentaENST00000495175
Transcript ID Bladder Colon Heart Lung Ovary Placenta
ENST00000495175 0.905±0.00 1.730±0.00 0.443±0.00 1.191±0.00 3.427±0.00 3.651±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004JL CIL_0004JL_0002 CGP 1:39841022-39902256

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004161 IEA dimethylallyltranstransferase activity
GO:0005524 IEA ATP binding
GO:0008033 IEA tRNA processing
GO:0009058 IEA biosynthetic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000102649 Trit1-001 protein_coding Mus_musculus 0 1013
ENSMUST00000147165 Trit1-002 processed_transcript Mus_musculus 0 610
ENSMUST00000141855 Trit1-003 processed_transcript Mus_musculus 0 475

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