C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tRNA isopentenyltransferase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000441669 TRIT1-003 ENSG00000043514 9606 - 1:39841051-39883491 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverOvaryTestisENST00000441669
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Ovary Testis
ENST00000441669 0.867±0.00 1.594±0.00 0.768±0.00 0.639±0.07 1.426±0.00 1.254±0.35 0.343±0.00 1.430±0.27 3.786±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004JL CIL_0004JL_0002 CGP 1:39841022-39902256

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0005524 IEA ATP binding
GO:0005575 ND cellular_component
GO:0008033 IEA tRNA processing
GO:0008270 IEA zinc ion binding
GO:0016740 IEA transferase activity
GO:0046872 IEA metal ion binding
GO:0052381 TAS tRNA dimethylallyltransferase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000102649 Trit1-001 protein_coding Mus_musculus 0 1317
ENSMUST00000147165 Trit1-002 processed_transcript Mus_musculus 0 756
ENSMUST00000141855 Trit1-003 processed_transcript Mus_musculus 0 475

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