C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: latrophilin 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000147226 Lphn3-026 ENSMUSG00000037605 10090 + 5:81020138-81388784 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastHeartLiverOvaryENSMUST00000147226
Transcript ID Adrenal Breast Heart Liver Ovary
ENSMUST00000147226 0.397±0.04 0.362±0.00 0.124±0.00 0.053±0.03 2.377±0.32

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001WQ CIL_0001WQ_0002 CGP 5:77349240-81825133
CIL_0001WJ CIL_0001WJ_0002 CGP 5:81020138-83355195

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000504896 LPHN3-012 protein_coding Homo_sapiens 0 270
ENST00000506700 LPHN3-015 protein_coding Homo_sapiens 0 270
ENST00000506720 LPHN3-008 protein_coding Homo_sapiens 0 553
ENST00000506746 LPHN3-009 protein_coding Homo_sapiens 0 553
ENST00000507164 LPHN3-004 protein_coding Homo_sapiens 0 558
ENST00000507625 LPHN3-016 protein_coding Homo_sapiens 0 558
ENST00000508693 LPHN3-011 protein_coding Homo_sapiens 0 558
ENST00000508946 LPHN3-007 protein_coding Homo_sapiens 0 270
ENST00000509089 LPHN3-018 retained_intron Homo_sapiens 2e-23 113
ENST00000509896 LPHN3-013 protein_coding Homo_sapiens 0 558
ENST00000511324 LPHN3-014 protein_coding Homo_sapiens 0 558
ENST00000512091 LPHN3-001 protein_coding Homo_sapiens 0 322
ENST00000514157 LPHN3-006 protein_coding Homo_sapiens 0 270
ENST00000514591 LPHN3-003 protein_coding Homo_sapiens 0 270
ENST00000514996 LPHN3-010 protein_coding Homo_sapiens 0 270

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