C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: microtubule-actin crosslinking factor 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000147228 Macf1-007 ENSMUSG00000028649 10090 - 4:123456349-123527648 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000990 CIL_000990_0002 VISTA 4:123304867-123907516
CIL_0001ZU CIL_0001ZU_0002 CGP 4:123349633-123718202

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001707 IMP mesoderm formation
GO:0003779 IDA actin binding
GO:0005515 IPI protein binding
GO:0006200 IEA ATP catabolic process
GO:0006620 IMP posttranslational protein targeting to membrane
GO:0006928 IMP cellular component movement
GO:0007163 IMP establishment or maintenance of cell polarity
GO:0008017 IDA microtubule binding
GO:0015629 IDA actin cytoskeleton
GO:0015630 IDA microtubule cytoskeleton
GO:0016055 IGI Wnt signaling pathway
GO:0016887 IEA ATPase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000289893 MACF1-005 protein_coding Homo_sapiens 0 935
ENST00000361689 MACF1-001 protein_coding Homo_sapiens 0 5869
ENST00000372915 MACF1-028 protein_coding Homo_sapiens 0 4940
ENST00000372925 MACF1-003 protein_coding Homo_sapiens 0 3245
ENST00000472385 MACF1-018 retained_intron Homo_sapiens 0 307
ENST00000476350 MACF1-004 processed_transcript Homo_sapiens 0 3245
ENST00000484393 MACF1-019 retained_intron Homo_sapiens 0 532
ENST00000485063 MACF1-017 retained_intron Homo_sapiens 0 446
ENST00000496804 MACF1-002 nonsense_mediated_decay Homo_sapiens 0 2638
ENST00000524432 MACF1-030 protein_coding Homo_sapiens 0 4536
ENST00000530262 MACF1-029 protein_coding Homo_sapiens 0 6990
ENST00000564288 MACF1-032 protein_coding Homo_sapiens 0 4940
ENST00000567887 MACF1-031 protein_coding Homo_sapiens 0 4940

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