C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001ZU_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000028533-ENSDARG00000006290 CGP 7955 19:36588262-36909916
GeneTranscriptPositionBiotype
ENSDARG00000006290 (ndufs5)
NADH dehydrogenase (ubiquinone) Fe-S protein 5 		ENSDART00000012167 (ndufs5-001) 36905556-36909916 protein_coding
ENSDARG00000028533 (macf1)
microtubule-actin crosslinking factor 1 		ENSDART00000054274 (macf1-201) 36588322-36874120 protein_coding
ENSDART00000146394 (macf1-001) 36588262-36888387 protein_coding
ENSDART00000151924 (macf1-002) 36687693-36704082 protein_coding
ENSDART00000152030 (macf1-003) 36589351-36600811 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_0001ZU_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000028649-ENSMUSG00000028648 CGP 10090 4:123349633-123718202
GeneTranscriptPositionBiotype
ENSMUSG00000028648 (Ndufs5)
NADH dehydrogenase (ubiquinone) Fe-S protein 5 		ENSMUST00000030401 (Ndufs5-001) 123712710-123718202 protein_coding
ENSMUST00000106206 (Ndufs5-003) 123712710-123718186 protein_coding
ENSMUST00000106207 (Ndufs5-004) 123712710-123716326 protein_coding
ENSMUST00000137312 (Ndufs5-002) 123712869-123718181 protein_coding
ENSMUSG00000028649 (Macf1)
microtubule-actin crosslinking factor 1 		ENSMUST00000082108 (Macf1-001) 123349716-123684360 protein_coding
ENSMUST00000084301 (Macf1-201) 123349718-123684360 protein_coding
ENSMUST00000097897 (Macf1-202) 123349633-123684360 protein_coding
ENSMUST00000106213 (Macf1-004) 123349716-123476367 protein_coding
ENSMUST00000106220 (Macf1-203) 123349718-123527459 protein_coding
ENSMUST00000106224 (Macf1-013) 123349720-123684360 protein_coding
ENSMUST00000123765 (Macf1-003) 123349633-123369931 protein_coding
ENSMUST00000125447 (Macf1-012) 123397275-123407515 processed_transcript
ENSMUST00000134458 (Macf1-008) 123349716-123499917 protein_coding
ENSMUST00000140596 (Macf1-011) 123383129-123390538 protein_coding
ENSMUST00000146000 (Macf1-006) 123538880-123564694 processed_transcript
ENSMUST00000147030 (Macf1-005) 123456349-123664752 protein_coding
ENSMUST00000147228 (Macf1-007) 123456349-123527648 protein_coding
ENSMUST00000149022 (Macf1-010) 123349716-123366449 protein_coding
ENSMUST00000151346 (Macf1-009) 123349716-123544831 protein_coding
ENSMUST00000154824 (Macf1-002) 123349716-123372367 protein_coding
ENSMUSG00000081170 (Gm12922)
predicted gene 12922 		ENSMUST00000120626 (Gm12922-001) 123709219-123710027 processed_pseudogene
ENSMUSG00000081528 (Gm12924)
predicted gene 12924 		ENSMUST00000121747 (Gm12924-001) 123435617-123435934 processed_pseudogene
ENSMUSG00000081585 (Gm12926)
predicted gene 12926 		ENSMUST00000121158 (Gm12926-001) 123630295-123630703 processed_pseudogene
ENSMUSG00000087307 (Gm12925)
predicted gene 12925 		ENSMUST00000130791 (Gm12925-003) 123667454-123671210 antisense
ENSMUST00000138861 (Gm12925-001) 123667616-123671217 antisense
ENSMUST00000140510 (Gm12925-002) 123665881-123668727 antisense

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001ZU_0001ENSDARG00000006290ENSDART00000012167ENSDARG00000028533ENSDART00000054274ENSDART00000146394ENSDART00000151924ENSDART00000152030CIL_0001ZU_0002ENSMUSG00000028648ENSMUST00000030401ENSMUST00000106206ENSMUST00000106207ENSMUST00000137312ENSMUSG00000028649ENSMUST00000082108ENSMUST00000084301ENSMUST00000097897ENSMUST00000106213ENSMUST00000106220ENSMUST00000106224ENSMUST00000123765ENSMUST00000125447ENSMUST00000134458ENSMUST00000140596ENSMUST00000146000ENSMUST00000147030ENSMUST00000147228ENSMUST00000149022ENSMUST00000151346ENSMUST00000154824ENSMUSG00000081170ENSMUST00000120626ENSMUSG00000081528ENSMUST00000121747ENSMUSG00000081585ENSMUST00000121158ENSMUSG00000087307ENSMUST00000130791ENSMUST00000138861ENSMUST00000140510
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001ZU_0001ENSDARG00000006290ENSDART00000012167ENSDARG00000028533ENSDART00000054274ENSDART00000146394ENSDART00000152030CIL_0001ZU_0002ENSMUSG00000028648ENSMUST00000030401ENSMUST00000106206ENSMUST00000137312ENSMUSG00000028649ENSMUST00000082108ENSMUST00000106213ENSMUST00000123765ENSMUST00000134458ENSMUST00000149022ENSMUST00000151346ENSMUST00000154824ENSMUSG00000081170ENSMUST00000120626ENSMUSG00000081528ENSMUST00000121747ENSMUSG00000081585ENSMUST00000121158ENSMUSG00000087307ENSMUST00000130791ENSMUST00000138861ENSMUST00000140510
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000006290 ENSDART00000012167 N/A N/A N/A 39.819±37.52 N/A N/A 75.465±79.13 18.851±9.22 11.976±0.00 N/A 158.496±0.00 N/A N/A N/A
ENSDARG00000028533 ENSDART00000054274 N/A N/A N/A 3.251±1.47 N/A N/A 7.591±0.00 4.493±2.92 0.188±0.00 N/A N/A N/A N/A N/A
ENSDART00000146394 N/A N/A N/A 2.114±0.00 N/A N/A N/A N/A 1.015±0.00 N/A 1.773±0.00 N/A N/A N/A
ENSDART00000151924 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000152030 N/A N/A N/A 47.405±0.00 N/A N/A N/A N/A N/A N/A 16.314±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000028648 ENSMUST00000030401 46.790±18.19 14.731±1.92 142.101±12.02 67.140±28.83 25.013±8.90 34.613±9.43 133.889±9.13 83.664±15.26 70.126±31.86 25.327±7.39 202.300±6.62 29.124±39.84 81.091±48.01 52.501±18.85
ENSMUST00000106206 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.583±0.00 N/A N/A
ENSMUST00000106207 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000137312 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 54.595±6.35 31.512±15.05 N/A
ENSMUSG00000028649 ENSMUST00000082108 N/A N/A N/A 5.182±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000084301 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000097897 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000106213 2.305±0.00 N/A 1.826±0.00 N/A 1.669±0.02 1.230±0.27 1.987±0.44 1.171±0.00 0.359±0.04 9.087±0.59 0.597±0.11 N/A N/A N/A
ENSMUST00000106220 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000106224 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000123765 N/A N/A 13.578±0.00 N/A N/A N/A N/A N/A 1.981±0.00 N/A N/A N/A 9.348±0.00 N/A
ENSMUST00000125447 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000134458 N/A 1.860±0.41 N/A 8.727±3.75 4.394±0.00 1.743±0.38 N/A 1.446±0.00 0.909±0.00 N/A 0.774±0.11 4.535±1.82 6.930±2.82 N/A
ENSMUST00000140596 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000146000 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000147030 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000147228 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000149022 N/A 6.902±0.70 18.682±0.00 N/A N/A 18.369±2.85 N/A 13.627±3.34 4.275±1.35 N/A N/A 11.766±1.16 N/A N/A
ENSMUST00000151346 N/A N/A N/A 5.172±0.00 3.968±1.21 1.358±0.10 2.117±0.61 2.205±0.00 0.793±0.28 8.869±0.50 0.731±0.12 7.429±3.73 7.474±6.24 2.375±1.25
ENSMUST00000154824 23.469±4.62 20.330±5.55 14.143±2.32 46.138±11.95 35.400±15.86 14.483±2.25 16.244±2.65 11.862±1.35 5.035±2.02 95.476±12.62 4.739±1.05 29.351±8.94 10.866±1.11 5.784±0.34
ENSMUSG00000081170 ENSMUST00000120626 0.362±0.17 0.274±0.07 0.122±0.07 2.483±3.31 0.282±0.11 0.231±0.16 0.148±0.16 0.150±0.06 2.098±6.19 0.176±0.08 0.082±0.00 0.200±0.11 0.130±0.02 0.085±0.05
ENSMUSG00000081528 ENSMUST00000121747 N/A N/A 0.070±0.02 0.298±0.00 N/A N/A N/A 0.226±0.00 0.155±0.14 0.635±0.32 N/A N/A 0.045±0.01 N/A
ENSMUSG00000081585 ENSMUST00000121158 0.190±0.02 N/A N/A 0.377±0.00 0.584±0.00 N/A 0.272±0.00 0.157±0.02 0.270±0.14 0.384±0.17 N/A 0.748±0.47 0.357±0.16 0.158±0.00
ENSMUSG00000087307 ENSMUST00000130791 0.135±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.117±0.06 0.092±0.00 0.170±0.08 N/A
ENSMUST00000138861 0.111±0.01 0.254±0.00 N/A N/A 0.548±0.37 0.486±0.00 0.113±0.00 0.161±0.07 0.409±0.32 N/A 0.130±0.00 0.274±0.00 0.325±0.21 4.002±0.01
ENSMUST00000140510 0.155±0.04 0.279±0.01 N/A N/A 0.197±0.12 N/A 0.143±0.07 0.152±0.10 0.033±0.00 0.153±0.05 0.067±0.02 0.459±0.26 0.178±0.00 3.224±0.37

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