C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: microtubule-actin crosslinking factor 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000372925 MACF1-003 ENSG00000127603 9606 + 1:39300314-39486987 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonLiverLungMuscleOvaryPlacentaTestisENST00000372925
Transcript ID Adipose Brain Breast Colon Liver Lung Muscle Ovary Placenta Testis
ENST00000372925 2.379±0.00 7.154±2.76 3.346±0.00 4.051±0.00 1.394±0.00 19.895±0.00 0.559±0.00 3.695±0.06 3.437±1.64 6.700±1.18

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008G7 CIL_0008G7_0001 VISTA 1:38483085-39084457
CIL_0007Q3 CIL_0007Q3_0001 VISTA 1:38525828-39126769
CIL_000990 CIL_000990_0001 VISTA 1:38863737-39466035

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0005515 IEA protein binding
GO:0007050 IEA cell cycle arrest

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000134458 Macf1-008 protein_coding Mus_musculus 0 17140
ENSMUST00000097897 Macf1-202 protein_coding Mus_musculus 0 12380
ENSMUST00000082108 Macf1-001 protein_coding Mus_musculus 0 12380
ENSMUST00000084301 Macf1-201 protein_coding Mus_musculus 0 12380
ENSMUST00000106220 Macf1-203 protein_coding Mus_musculus 0 12380
ENSMUST00000106224 Macf1-013 protein_coding Mus_musculus 0 12340
ENSMUST00000151346 Macf1-009 protein_coding Mus_musculus 0 8586
ENSMUST00000106213 Macf1-004 protein_coding Mus_musculus 0 8508
ENSMUST00000147030 Macf1-005 protein_coding Mus_musculus 0 3245
ENSMUST00000147228 Macf1-007 protein_coding Mus_musculus 0 3245
ENSMUST00000154824 Macf1-002 protein_coding Mus_musculus 0 3186
ENSMUST00000149022 Macf1-010 protein_coding Mus_musculus 0 1725
ENSMUST00000123765 Macf1-003 protein_coding Mus_musculus 0 1725
ENSMUST00000140596 Macf1-011 protein_coding Mus_musculus 0 1428
ENSMUST00000125447 Macf1-012 processed_transcript Mus_musculus 0 1016
ENSDART00000054274 macf1-201 protein_coding Danio_rerio 4e-27 130
ENSDART00000146394 macf1-001 protein_coding Danio_rerio 4e-27 130
ENSDART00000092780 DST-201 protein_coding Danio_rerio 0.000000000001 82

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