C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: protein arginine N-methyltransferase 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000147401 Prmt3-005 ENSMUSG00000030505 10090 + 7:49778437-49826894 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainOvaryPlacentaTestisENSMUST00000147401
Transcript ID Brain Ovary Placenta Testis
ENSMUST00000147401 3.472±0.00 8.366±0.00 6.698±0.00 0.548±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004AQ CIL_0004AQ_0003 CGP 7:49759106-49858265
CIL_0004AR CIL_0004AR_0003 CGP 7:49778346-49963856

Gene Ontology

GO IDEvidence TypeGO Description
GO:0006355 IBA regulation of transcription, DNA-templated
GO:0008469 IBA histone-arginine N-methyltransferase activity
GO:0019919 IBA peptidyl-arginine methylation, to asymmetrical-dimethyl arginine
GO:0034969 IBA histone arginine methylation
GO:0035242 IBA protein-arginine omega-N asymmetric methyltransferase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000330796 PRMT3-002 nonsense_mediated_decay Homo_sapiens 0 1195
ENST00000331079 PRMT3-001 protein_coding Homo_sapiens 0 1195
ENST00000437750 PRMT3-003 protein_coding Homo_sapiens 0 1110
ENST00000525188 PRMT3-006 nonsense_mediated_decay Homo_sapiens 0 231
ENST00000529592 PRMT3-004 retained_intron Homo_sapiens 0 595

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