C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: synaptoporin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000147677 Synpr-004 ENSMUSG00000056296 10090 + 14:13454071-13610502 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastKidneyTestisENSMUST00000147677
Transcript ID Breast Kidney Testis
ENSMUST00000147677 0.066±0.00 0.021±0.00 0.007±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00078O CIL_00078O_0002 CGP 14:13284780-13683148

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000295894 SYNPR-004 protein_coding Homo_sapiens 0 1064
ENST00000450542 SYNPR-002 protein_coding Homo_sapiens 0 484
ENST00000460711 SYNPR-007 protein_coding Homo_sapiens 0 675
ENST00000465156 SYNPR-015 protein_coding Homo_sapiens 0 651
ENST00000472899 SYNPR-013 protein_coding Homo_sapiens 0 233
ENST00000478300 SYNPR-001 protein_coding Homo_sapiens 0 676
ENST00000478744 SYNPR-014 processed_transcript Homo_sapiens 0 652
ENST00000479198 SYNPR-006 protein_coding Homo_sapiens 0 893
ENST00000493532 SYNPR-011 processed_transcript Homo_sapiens 0 673
ENST00000498449 SYNPR-005 nonsense_mediated_decay Homo_sapiens 0 584

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