C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: chromodomain helicase DNA binding protein 8
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000147827 Chd8-004 ENSMUSG00000053754 10090 - 14:52198476-52206097 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyLiverLungOvaryPlacentaTestisENSMUST00000147827
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000147827 3.296±0.99 7.997±3.46 4.597±0.88 5.745±1.15 6.034±3.16 3.607±0.54 2.626±0.92 2.149±0.52 5.576±2.23 8.130±3.48 2.769±0.28 2.472±0.15

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00078L CIL_00078L_0002 CGP 14:52160419-52237791
CIL_0003JD CIL_0003JD_0002 CGP 14:52198151-52279545

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000399982 CHD8-201 protein_coding Homo_sapiens 0 1170
ENST00000430710 CHD8-001 protein_coding Homo_sapiens 0 1170
ENST00000553870 CHD8-012 protein_coding Homo_sapiens 0 521
ENST00000555301 CHD8-011 retained_intron Homo_sapiens 0 695
ENST00000557329 CHD8-009 retained_intron Homo_sapiens 0 385
ENST00000557364 CHD8-002 protein_coding Homo_sapiens 0 1170
ENST00000557727 CHD8-005 retained_intron Homo_sapiens 0 819

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