C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RAS-like, family 2, locus 9
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000147835 Rasl2-9-001 ENSMUSG00000083649 10090 - 7:5124938-5125950 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000147835
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000147835 0.693±0.44 0.434±0.13 0.227±0.03 0.147±0.08 0.567±0.17 0.214±0.11 2.040±0.21 1.714±0.40 0.298±0.12 0.183±0.14 0.799±0.22 0.568±0.28 0.309±0.20 76.055±20.84

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003924 IEA GTPase activity
GO:0005525 IEA GTP binding
GO:0005634 IEA nucleus
GO:0006184 IEA GTP catabolic process
GO:0006886 IEA intracellular protein transport
GO:0006913 IEA nucleocytoplasmic transport
GO:0007264 IEA small GTPase mediated signal transduction

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000392367 RAN-005 protein_coding Homo_sapiens 0 603
ENST00000392369 RAN-003 protein_coding Homo_sapiens 0 1079
ENST00000411454 RANP1-001 processed_pseudogene Homo_sapiens 0 699
ENST00000413691 RANP6-001 processed_pseudogene Homo_sapiens 0 608
ENST00000414129 RANP1-001 processed_pseudogene Homo_sapiens 0 693
ENST00000420270 RANP1-001 processed_pseudogene Homo_sapiens 0 693
ENST00000427731 RANP5-001 processed_pseudogene Homo_sapiens 0 466
ENST00000444720 RANP8-001 processed_pseudogene Homo_sapiens 0 453
ENST00000445266 RANP1-001 processed_pseudogene Homo_sapiens 0 688
ENST00000445316 RANP1-001 processed_pseudogene Homo_sapiens 0 693
ENST00000448750 RAN-004 protein_coding Homo_sapiens 0 1020
ENST00000455094 RANP1-001 processed_pseudogene Homo_sapiens 0 693
ENST00000464211 RAN-011 retained_intron Homo_sapiens 0 551
ENST00000477395 RAN-002 retained_intron Homo_sapiens 0 514
ENST00000535090 RAN-010 protein_coding Homo_sapiens 0 667
ENST00000536606 RAN-009 nonsense_mediated_decay Homo_sapiens 0 534
ENST00000539498 RAN-006 retained_intron Homo_sapiens 0 303
ENST00000541630 RAN-008 protein_coding Homo_sapiens 0 974
ENST00000541679 RAN-012 protein_coding Homo_sapiens 0 472
ENST00000543796 RAN-001 protein_coding Homo_sapiens 0 1072

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