C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RAN, member RAS oncogene family
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000535090 RAN-010 ENSG00000132341 9606 + 12:130872076-130875784 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderColonHeartKidneyLungMuscleOvaryENST00000535090
Transcript ID Adipose Bladder Colon Heart Kidney Lung Muscle Ovary
ENST00000535090 20.132±0.00 3.152±0.00 17.000±9.52 2.719±0.00 5.843±0.00 6.478±0.00 7.269±0.00 23.829±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000430 CIL_000430_0001 CGP 12:130789600-130877678
CIL_00042Z CIL_00042Z_0001 CGP 12:130871879-131141469

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003924 IEA GTPase activity
GO:0005525 IEA GTP binding
GO:0005622 IEA intracellular
GO:0006184 IEA GTP catabolic process
GO:0006886 IEA intracellular protein transport
GO:0006913 IEA nucleocytoplasmic transport
GO:0007165 IEA signal transduction
GO:0007264 IEA small GTPase mediated signal transduction
GO:0015031 IEA protein transport
GO:0016020 IEA membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000031383 Ran-001 protein_coding Mus_musculus 0 782
ENSMUST00000111343 Ran-002 protein_coding Mus_musculus 0 723
ENSMUST00000120980 Gm13461-001 processed_pseudogene Mus_musculus 0 669
ENSMUST00000147835 Rasl2-9-001 protein_coding Mus_musculus 0 667

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