C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: TATA box binding protein (Tbp)-associated factor, RNA polymerase I, C
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000147964 Taf1c-002 ENSMUSG00000031832 10090 - 8:119597975-119605222 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000147964
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000147964 1.030±0.05 2.628±0.54 1.466±0.62 1.477±0.30 1.683±0.00 2.098±0.25 0.346±0.04 0.690±0.15 0.839±0.46 1.330±0.18 0.529±0.22 2.720±1.63 1.074±0.28

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004ZQ CIL_0004ZQ_0002 CGP 8:119561979-119598454
CIL_0002AR CIL_0002AR_0002 CGP 8:119575235-119605222
CIL_0002AS CIL_0002AS_0002 CGP 8:119597975-119616926

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000120 TAS RNA polymerase I transcription factor complex
GO:0005515 IPI protein binding
GO:0006360 TAS transcription from RNA polymerase I promoter

Homologs

No Homologs available.

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