C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: actinin alpha 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000148196 Actn4-003 ENSMUSG00000054808 10090 - 7:28913378-28949759 protein_coding

Mus musculus EnsemblGRCm38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

No expression data.

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005737 IDA cytoplasm
GO:0030018 IDA Z disc
GO:0030863 IDA cortical cytoskeleton
GO:0051015 IDA actin filament binding
GO:0070830 IEA tight junction assembly
GO:1902396 IEA protein localization to tight junction

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000130717 ACTN4 (3 of 3)-201 protein_coding Danio_rerio 0 416
ENSDART00000005682 actn3a-001 protein_coding Danio_rerio 0 390
ENST00000252699 ACTN4-001 protein_coding Homo_sapiens 0 616
ENST00000495553 ACTN4-002 processed_transcript Homo_sapiens 0 612
ENST00000588618 ACTN4-007 retained_intron Homo_sapiens 0 616

Loading