C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: actinin alpha 3a
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000005682 actn3a-001 ENSDARG00000013755 7955 + 21:26777287-26799372 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000005682
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000005682 0.419±0.24 0.185±0.08 8.394±4.59 0.147±0.00 506.415±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003779 IEA actin binding
GO:0005509 IEA calcium ion binding
GO:0005515 IEA protein binding
GO:0005575 ND cellular_component

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000006626 Actn3-001 protein_coding Mus_musculus 0 1530
ENSMUST00000021554 Actn1-201 protein_coding Mus_musculus 0 1304
ENSMUST00000064204 Actn2-001 protein_coding Mus_musculus 0 1611
ENSMUST00000068045 Actn4-001 protein_coding Mus_musculus 0 1317
ENSMUST00000110616 Actn2-002 protein_coding Mus_musculus 0 363
ENSMUST00000127210 Actn4-005 protein_coding Mus_musculus 0 990
ENSMUST00000138811 Actn3-002 processed_transcript Mus_musculus 0 416
ENSMUST00000140622 Actn4-004 protein_coding Mus_musculus 0 516
ENSMUST00000144909 Actn4-002 processed_transcript Mus_musculus 0 785
ENSMUST00000148196 Actn4-003 protein_coding Mus_musculus 0 390
ENSMUST00000150493 Actn4-006 processed_transcript Mus_musculus 0 398
ENSMUST00000167327 Actn1-202 protein_coding Mus_musculus 0 1386
ENSMUST00000168193 Actn2-201 protein_coding Mus_musculus 0 1611
ENST00000193403 ACTN1-001 protein_coding Homo_sapiens 0 1537
ENST00000366578 ACTN2-001 protein_coding Homo_sapiens 0 1537
ENST00000376839 ACTN1-007 protein_coding Homo_sapiens 0 1557
ENST00000394419 ACTN1-005 protein_coding Homo_sapiens 0 1463
ENST00000438964 ACTN1-002 protein_coding Homo_sapiens 0 1646
ENST00000492634 ACTN2-004 processed_transcript Homo_sapiens 0 544
ENST00000502692 ACTN3-003 protein_coding Homo_sapiens 0 1539
ENST00000513398 ACTN3-001 protein_coding Homo_sapiens 0 1613
ENST00000538545 ACTN1-006 protein_coding Homo_sapiens 0 1618
ENST00000542672 ACTN2-201 protein_coding Homo_sapiens 0 1515
ENST00000546208 ACTN2-202 protein_coding Homo_sapiens 0 544
ENST00000553370 ACTN1-015 protein_coding Homo_sapiens 0 418
ENST00000553779 ACTN1-016 protein_coding Homo_sapiens 0 303
ENST00000554158 ACTN1-017 processed_transcript Homo_sapiens 0 350
ENST00000554508 ACTN1-018 processed_transcript Homo_sapiens 0 331
ENST00000555616 ACTN1-012 protein_coding Homo_sapiens 0 562
ENST00000556203 ACTN1-010 processed_transcript Homo_sapiens 8e-17 92
ENST00000556433 ACTN1-011 protein_coding Homo_sapiens 0 542
ENST00000556571 ACTN1-014 protein_coding Homo_sapiens 0 303

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