C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: actinin, alpha 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000588618 ACTN4-007 ENSG00000130402 9606 + 19:38647649-38721878 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000588618
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000588618 107.171±0.00 14.450±0.00 6.221±0.00 30.720±0.00 45.535±10.97 10.492±6.06 10.790±0.00 20.500±0.00 17.948±0.00 5.662±0.00 140.798±110.38 196.744±0.00 14.943±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000068045 Actn4-001 protein_coding Mus_musculus 0 1989
ENSMUST00000127210 Actn4-005 protein_coding Mus_musculus 0 1825
ENSMUST00000167327 Actn1-202 protein_coding Mus_musculus 0 1291
ENSMUST00000021554 Actn1-201 protein_coding Mus_musculus 0 1291
ENSMUST00000006626 Actn3-001 protein_coding Mus_musculus 0 996
ENSMUST00000168193 Actn2-201 protein_coding Mus_musculus 0 965
ENSMUST00000064204 Actn2-001 protein_coding Mus_musculus 0 965
ENSMUST00000140622 Actn4-004 protein_coding Mus_musculus 0 924
ENSMUST00000144909 Actn4-002 processed_transcript Mus_musculus 0 797
ENSMUST00000150493 Actn4-006 processed_transcript Mus_musculus 0 760
ENSMUST00000148196 Actn4-003 protein_coding Mus_musculus 0 616
ENSDART00000130717 ACTN4 (3 of 3)-201 protein_coding Danio_rerio 0 529
ENSDART00000032887 ACTN4 (1 of 3)-201 protein_coding Danio_rerio 0 453

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