C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: regulator of telomere elongation helicase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000148252 Rtel1-008 ENSMUSG00000038685 10090 + 2:181328617-181356616 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalColonLiverOvaryENSMUST00000148252
Transcript ID Adrenal Colon Liver Ovary
ENSMUST00000148252 2.263±0.38 1.372±0.16 0.805±0.00 2.922±0.51

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003U1 CIL_0003U1_0002 CGP 2:181306459-181356616

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000723 IMP telomere maintenance
GO:0003677 IEA DNA binding
GO:0004003 IEA ATP-dependent DNA helicase activity
GO:0005524 IEA ATP binding
GO:0005634 IDA nucleus
GO:0006200 IEA ATP catabolic process
GO:0032508 IEA DNA duplex unwinding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000318100 RTEL1-201 protein_coding Homo_sapiens 0 1696
ENST00000360203 RTEL1-011 protein_coding Homo_sapiens 0 1696
ENST00000370003 RTEL1-002 protein_coding Homo_sapiens 0 259
ENST00000370018 RTEL1-001 protein_coding Homo_sapiens 0 1696
ENST00000425905 RTEL1-008 protein_coding Homo_sapiens 0 337
ENST00000480273 RTEL1-TNFRSF6B-003 retained_intron Homo_sapiens 0 900
ENST00000482936 RTEL1-TNFRSF6B-001 nonsense_mediated_decay Homo_sapiens 0 1696
ENST00000496281 RTEL1-TNFRSF6B-004 retained_intron Homo_sapiens 0 259
ENST00000496816 RTEL1-003 nonsense_mediated_decay Homo_sapiens 0 283
ENST00000508582 RTEL1-014 protein_coding Homo_sapiens 0 1696
ENST00000622743 RTEL1-TNFRSF6B-201 protein_coding Homo_sapiens 0 1696

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