C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | RTEL1-TNFRSF6B readthrough (NMD candidate) | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000622743  |
RTEL1-TNFRSF6B-201 |
ENSG00000026036 |
9606 | + |
20:63659403-63698698  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0003U1 | CIL_0003U1_0001 | CGP | 20:63639705-63696253 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0004872 | TAS | receptor activity |
| GO:0005515 | IPI:IEA | protein binding |
| GO:0005615 | NAS | extracellular space |
| GO:0006915 | IEA | apoptotic process |
| GO:0043066 | TAS | negative regulation of apoptotic process |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000108815
|
Rtel1-006 | protein_coding | Mus_musculus | 0 | 2398 |
|
ENSMUST00000048608
|
Rtel1-005 | protein_coding | Mus_musculus | 0 | 2398 |
|
ENSMUST00000108814
|
Rtel1-007 | protein_coding | Mus_musculus | 0 | 2398 |
|
ENSMUST00000054622
|
Rtel1-001 | protein_coding | Mus_musculus | 0 | 2398 |
|
ENSMUST00000098971
|
Rtel1-003 | protein_coding | Mus_musculus | 0 | 2398 |
|
ENSMUST00000139608
|
Rtel1-004 | retained_intron | Mus_musculus | 0 | 2065 |
|
ENSMUST00000148252
|
Rtel1-008 | protein_coding | Mus_musculus | 0 | 1696 |
|
ENSMUST00000146273
|
Rtel1-002 | retained_intron | Mus_musculus | 0 | 1151 |
|
ENSMUST00000130935
|
Rtel1-013 | retained_intron | Mus_musculus | 0 | 568 |
|
ENSMUST00000153112
|
Rtel1-009 | protein_coding | Mus_musculus | 0 | 411 |
