C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: ribosomal protein S6 kinase, polypeptide 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000149392 Rps6kb1-006 ENSMUSG00000020516 10090 - 11:86502599-86511645 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryENSMUST00000149392
Transcript ID Ovary
ENSMUST00000149392 3.567±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00039N CIL_00039N_0002 CGP 11:86267033-86499025
CIL_0008VS CIL_0008VS_0002 VISTA 11:86270110-86871719
CIL_0008Y2 CIL_0008Y2_0002 VISTA 11:86286196-86887829
CIL_00081F CIL_00081F_0002 VISTA 11:86323484-86925483

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000225577 RPS6KB1-001 protein_coding Homo_sapiens 0 555
ENST00000393021 RPS6KB1-201 protein_coding Homo_sapiens 0 555
ENST00000406116 RPS6KB1-002 protein_coding Homo_sapiens 2.00386e-43 182
ENST00000441215 AC126365.1-001 transcribed_unprocessed_pseudogene Homo_sapiens 0 459
ENST00000443572 RPS6KB1-008 protein_coding Homo_sapiens 0 555
ENST00000472940 RPS6KB1-003 nonsense_mediated_decay Homo_sapiens 0 555
ENST00000475155 RPS6KB1-006 retained_intron Homo_sapiens 0 556
ENST00000591035 RP11-178C3.1-001 protein_coding Homo_sapiens 4.06377e-44 182

Loading