C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: 1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000149565 Agpat5-001 ENSMUSG00000031467 10090 + 8:18846277-18891361 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000149565
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000149565 0.457±0.14 0.711±0.05 1.358±0.41 0.534±0.02 0.931±0.00 0.270±0.03 0.608±0.14 0.311±0.10 0.719±0.05 0.498±0.07 0.329±0.15 0.408±0.23 0.209±0.18

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008KU CIL_0008KU_0002 VISTA 8:18411246-19012747
CIL_00006Y CIL_00006Y_0003 CGP 8:18690263-18891361
CIL_0005PC CIL_0005PC_0002 CGP 8:18846277-18950975

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002244 IGI hematopoietic progenitor cell differentiation
GO:0003841 IDA 1-acylglycerol-3-phosphate O-acyltransferase activity
GO:0005634 IEA nucleus
GO:0005739 IDA mitochondrion
GO:0005783 IEA endoplasmic reticulum
GO:0006639 IDA acylglycerol metabolic process
GO:0016021 IEA integral component of membrane
GO:0016024 IEA CDP-diacylglycerol biosynthetic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000285518 AGPAT5-001 protein_coding Homo_sapiens 0 1219
ENST00000455855 AGPAT5P1-001 processed_pseudogene Homo_sapiens 0 422
ENST00000523234 AGPAT5-002 nonsense_mediated_decay Homo_sapiens 0 274
ENST00000523586 AGPAT5-004 nonsense_mediated_decay Homo_sapiens 4e-34 148

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