C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: chromodomain helicase DNA binding protein 8
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000149975 Chd8-002 ENSMUSG00000053754 10090 - 14:52198451-52237791 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainLiverMuscleOvaryPlacentaTestisENSMUST00000149975
Transcript ID Bladder Brain Liver Muscle Ovary Placenta Testis
ENSMUST00000149975 3.674±1.01 5.710±4.68 0.833±0.24 1.418±0.34 6.958±3.72 6.470±5.24 5.527±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00078L CIL_00078L_0002 CGP 14:52160419-52237791
CIL_0003JD CIL_0003JD_0002 CGP 14:52198151-52279545

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000009942 chd8-201 protein_coding Danio_rerio 0 898
ENSDART00000013676 chd8-202 protein_coding Danio_rerio 0 898
ENSDART00000131837 chd8-001 protein_coding Danio_rerio 0 878
ENST00000399982 CHD8-201 protein_coding Homo_sapiens 0 9099
ENST00000430710 CHD8-001 protein_coding Homo_sapiens 0 9136
ENST00000553283 CHD8-007 protein_coding Homo_sapiens 0 307
ENST00000553870 CHD8-012 protein_coding Homo_sapiens 0 521
ENST00000554384 CHD8-010 retained_intron Homo_sapiens 0 488
ENST00000555301 CHD8-011 retained_intron Homo_sapiens 0 695
ENST00000555935 CHD8-004 protein_coding Homo_sapiens 0 3308
ENST00000555962 CHD8-008 processed_transcript Homo_sapiens 0 929
ENST00000557329 CHD8-009 retained_intron Homo_sapiens 0 385
ENST00000557364 CHD8-002 protein_coding Homo_sapiens 0 9084
ENST00000557727 CHD8-005 retained_intron Homo_sapiens 0 843

Loading