C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | rhomboid family 1 (Drosophila) | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000150381  |
Rhbdf1-001 |
ENSMUSG00000020282 |
10090 | - |
11:32215068-32222244  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_00094P | CIL_00094P_0002 | VISTA | 11:31945270-32546411 |
| CIL_0008HK | CIL_0008HK_0002 | VISTA | 11:31950452-32552344 |
| CIL_00015Q | CIL_00015Q_0002 | CGP | 11:32205415-32222300 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0004252 | IEA | serine-type endopeptidase activity |
| GO:0006508 | IEA | proteolysis |
| GO:0016021 | IEA | integral component of membrane |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000262316
|
RHBDF1-001 | protein_coding | Homo_sapiens | 1e-16 | 94 |
|
ENST00000417043
|
RHBDF1-005 | nonsense_mediated_decay | Homo_sapiens | 3e-17 | 94 |
|
ENST00000419764
|
RHBDF1-012 | protein_coding | Homo_sapiens | 0 | 459 |
|
ENST00000428730
|
RHBDF1-013 | nonsense_mediated_decay | Homo_sapiens | 1e-16 | 94 |
|
ENST00000450643
|
RHBDF1-010 | protein_coding | Homo_sapiens | 2e-17 | 94 |
|
ENST00000487201
|
RHBDF1-003 | retained_intron | Homo_sapiens | 7e-17 | 94 |
