C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00015Q_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000161981-ENSG00000007384 CGP 9606 16:53010-76355
GeneTranscriptPositionBiotype
ENSG00000007384 (RHBDF1)
rhomboid 5 homolog 1 (Drosophila) 		ENST00000262316 (RHBDF1-001) 58059-72631 protein_coding
ENST00000417043 (RHBDF1-005) 62973-65037 nonsense_mediated_decay
ENST00000419764 (RHBDF1-012) 63743-65039 protein_coding
ENST00000428730 (RHBDF1-013) 58062-65039 nonsense_mediated_decay
ENST00000448893 (RHBDF1-008) 58137-59762 protein_coding
ENST00000450643 (RHBDF1-010) 63157-76355 protein_coding
ENST00000472390 (RHBDF1-011) 64552-76341 retained_intron
ENST00000482904 (RHBDF1-009) 61425-62206 retained_intron
ENST00000486045 (RHBDF1-007) 58974-60193 retained_intron
ENST00000487201 (RHBDF1-003) 63037-72621 retained_intron
ENST00000493647 (RHBDF1-006) 59233-60680 retained_intron
ENSG00000161980 (POLR3K)
polymerase (RNA) III (DNA directed) polypeptide K, 12.3 kDa 		ENST00000293860 (POLR3K-001) 46407-53628 protein_coding
ENST00000481810 (POLR3K-002) 47236-52142 retained_intron
ENSG00000161981 (SNRNP25)
small nuclear ribonucleoprotein 25kDa (U11/U12) 		ENST00000293861 (SNRNP25-001) 53010-57669 protein_coding
ENST00000383018 (SNRNP25-201) 53829-57668 protein_coding
ENST00000397876 (SNRNP25-004) 53887-57372 nonsense_mediated_decay
ENST00000417493 (SNRNP25-006) 53899-56613 protein_coding
ENST00000466183 (SNRNP25-002) 54960-57444 retained_intron
ENST00000481947 (SNRNP25-005) 55495-57453 retained_intron
ENST00000493672 (SNRNP25-007) 53899-55871 processed_transcript
ENSG00000278995 (Z69720.3)
 ENST00000624755 (Z69720.3-001) 74683-74961 TEC
CIL_00015Q_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000040767-ENSMUSG00000020282 CGP 10090 11:32205415-32222300
GeneTranscriptPositionBiotype
ENSMUSG00000020282 (Rhbdf1)
rhomboid family 1 (Drosophila) 		ENSMUST00000020524 (Rhbdf1-006) 32209585-32222300 protein_coding
ENSMUST00000132578 (Rhbdf1-002) 32214286-32222280 nonsense_mediated_decay
ENSMUST00000137125 (Rhbdf1-004) 32210399-32211270 retained_intron
ENSMUST00000142274 (Rhbdf1-005) 32209950-32210900 retained_intron
ENSMUST00000143036 (Rhbdf1-007) 32209586-32217317 retained_intron
ENSMUST00000143988 (Rhbdf1-009) 32209804-32211139 protein_coding
ENSMUST00000144902 (Rhbdf1-003) 32216009-32222259 protein_coding
ENSMUST00000146179 (Rhbdf1-008) 32209587-32222280 nonsense_mediated_decay
ENSMUST00000150381 (Rhbdf1-001) 32215068-32222244 protein_coding
ENSMUSG00000040767 (Snrnp25)
small nuclear ribonucleoprotein 25 (U11/U12) 		ENSMUST00000039601 (Snrnp25-001) 32205415-32208984 protein_coding
ENSMUST00000121182 (Snrnp25-005) 32205488-32208873 protein_coding
ENSMUST00000125837 (Snrnp25-002) 32206762-32208984 retained_intron
ENSMUST00000149043 (Snrnp25-003) 32205446-32208408 protein_coding
ENSMUST00000155736 (Snrnp25-004) 32205458-32207651 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00015Q_0001ENSG00000007384ENST00000262316ENST00000417043ENST00000419764ENST00000428730ENST00000448893ENST00000450643ENST00000472390ENST00000482904ENST00000486045ENST00000487201ENST00000493647ENSG00000161980ENST00000293860ENST00000481810ENSG00000161981ENST00000293861ENST00000383018ENST00000397876ENST00000417493ENST00000466183ENST00000481947ENST00000493672ENSG00000278995ENST00000624755CIL_00015Q_0002ENSMUSG00000020282ENSMUST00000020524ENSMUST00000132578ENSMUST00000137125ENSMUST00000142274ENSMUST00000143036ENSMUST00000143988ENSMUST00000144902ENSMUST00000146179ENSMUST00000150381ENSMUSG00000040767ENSMUST00000039601ENSMUST00000121182ENSMUST00000125837ENSMUST00000149043ENSMUST00000155736
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00015Q_0001ENSG00000007384ENST00000262316ENST00000428730ENST00000448893ENST00000450643ENST00000482904ENST00000493647ENSG00000161980ENST00000293860ENST00000481810ENSG00000161981ENST00000293861ENST00000383018ENST00000397876ENST00000417493ENST00000466183ENST00000481947ENST00000493672ENSG00000278995ENST00000624755CIL_00015Q_0002ENSMUSG00000020282ENSMUST00000020524ENSMUST00000132578ENSMUST00000143036ENSMUST00000143988ENSMUST00000146179ENSMUSG00000040767ENSMUST00000039601ENSMUST00000121182ENSMUST00000125837ENSMUST00000149043ENSMUST00000155736
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000007384 ENST00000262316 8.188±0.00 7.414±0.00 0.187±0.00 1.520±0.00 7.065±0.00 1.383±0.00 1.251±1.13 4.220±0.00 0.269±0.00 8.702±0.00 1.942±0.00 10.672±8.42 13.642±6.22 3.764±0.00
ENST00000417043 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000419764 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000428730 N/A N/A N/A 0.582±0.06 2.312±0.00 1.774±1.58 1.472±0.00 1.945±0.00 0.701±0.00 8.400±0.00 1.806±0.11 9.784±3.89 7.383±2.19 2.631±0.00
ENST00000448893 N/A N/A 1.900±0.00 1.292±0.00 5.072±0.00 0.815±0.00 1.809±0.52 0.955±0.00 1.128±0.60 11.667±0.00 N/A 9.546±5.06 20.881±0.00 2.076±0.00
ENST00000450643 N/A N/A N/A N/A N/A N/A 0.495±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000472390 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000482904 N/A N/A 1.584±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000486045 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000487201 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000493647 N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.127±0.00 N/A N/A N/A N/A
ENSG00000161980 ENST00000293860 0.934±0.00 3.063±0.00 0.272±0.00 3.022±0.63 0.982±0.61 0.692±0.00 1.449±1.07 1.846±1.00 1.182±0.51 1.082±0.06 3.237±0.53 3.475±1.69 5.871±1.67 1.689±0.00
ENST00000481810 1.845±0.00 6.268±0.00 0.956±0.00 N/A 3.521±0.00 1.077±0.00 N/A 1.275±0.00 2.795±0.00 1.982±0.00 3.151±0.00 2.424±1.10 N/A 2.925±0.00
ENSG00000161981 ENST00000293861 1.803±0.00 5.797±0.00 N/A 3.176±1.44 1.435±1.09 0.249±0.00 N/A 4.062±0.00 0.288±0.00 N/A N/A 1.110±0.93 1.784±0.00 1.503±0.00
ENST00000383018 1.094±0.00 N/A N/A 10.443±5.20 9.459±0.00 5.583±0.00 6.715±5.52 5.484±4.09 2.878±2.27 4.452±0.00 5.686±3.19 14.959±7.41 7.992±2.77 5.040±0.89
ENST00000397876 2.632±0.00 6.423±0.00 0.611±0.00 16.717±0.00 N/A 6.385±0.00 17.669±0.00 6.429±0.00 8.877±0.00 5.114±0.00 17.769±0.00 4.835±0.00 5.982±0.00 4.897±0.19
ENST00000417493 N/A N/A 1.668±0.00 7.467±0.00 N/A 1.898±0.00 18.091±0.00 N/A N/A N/A N/A N/A N/A 9.209±0.00
ENST00000466183 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.349±0.00 1.850±0.00 N/A 2.580±0.00 N/A
ENST00000481947 N/A N/A N/A N/A N/A N/A N/A 1.246±0.00 N/A N/A N/A N/A N/A N/A
ENST00000493672 N/A N/A N/A N/A 2.077±0.00 N/A 3.745±0.00 2.828±0.00 N/A N/A 8.522±0.00 N/A N/A N/A
ENSG00000278995 ENST00000624755 N/A 0.074±0.00 N/A 0.352±0.00 0.078±0.00 N/A 0.136±0.00 0.370±0.00 N/A 0.518±0.00 N/A 0.280±0.02 0.235±0.00 0.469±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000020282 ENSMUST00000020524 34.785±8.07 21.634±1.47 27.815±4.00 10.267±1.15 35.177±3.72 23.540±1.87 10.892±2.52 17.893±1.98 3.029±0.77 36.909±3.42 4.527±1.37 34.216±9.72 11.085±5.49 1.222±0.14
ENSMUST00000132578 N/A 26.868±5.24 N/A N/A N/A 15.950±0.54 N/A N/A N/A N/A N/A 36.235±4.10 N/A N/A
ENSMUST00000137125 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000142274 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000143036 5.051±0.00 4.809±1.15 5.277±0.24 0.936±0.72 6.826±1.09 4.083±0.58 1.314±0.22 2.398±0.55 0.430±0.10 6.653±0.34 0.790±0.09 7.460±2.77 1.247±0.58 0.190±0.01
ENSMUST00000143988 N/A N/A N/A N/A N/A 43.423±0.00 N/A N/A N/A N/A 5.356±0.00 N/A N/A N/A
ENSMUST00000144902 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000146179 N/A N/A 4.295±0.00 1.497±0.00 2.701±0.00 N/A 2.567±0.57 4.209±0.59 N/A N/A 1.558±0.16 6.284±0.42 3.772±0.00 0.370±0.19
ENSMUST00000150381 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000040767 ENSMUST00000039601 6.353±2.21 0.878±0.42 10.798±0.16 17.874±5.92 4.191±1.37 9.758±1.77 4.444±1.08 5.842±0.58 22.922±27.09 5.084±1.19 5.548±0.77 7.167±2.48 20.339±7.91 16.031±1.20
ENSMUST00000121182 N/A N/A N/A 16.947±0.00 1.460±0.00 N/A N/A N/A N/A N/A N/A 4.766±0.00 6.790±0.99 N/A
ENSMUST00000125837 N/A N/A N/A N/A 1.966±0.00 N/A N/A N/A N/A 1.320±0.00 N/A N/A N/A N/A
ENSMUST00000149043 2.626±0.68 0.955±0.35 N/A N/A 2.063±0.01 3.625±0.00 1.499±0.07 3.255±0.33 1.107±0.46 2.412±0.59 N/A 5.535±2.90 N/A 6.564±0.87
ENSMUST00000155736 4.506±0.55 2.553±0.36 N/A N/A 4.578±1.39 14.250±2.88 N/A 2.852±0.60 1.037±0.33 5.860±0.00 N/A 7.110±3.40 N/A 10.474±0.00

Loading