C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: histone cell cycle regulation defective homolog A (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000150799 Hira-008 ENSMUSG00000022702 10090 + 16:18933013-18947518 processed_transcript

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainOvaryPlacentaENSMUST00000150799
Transcript ID Brain Ovary Placenta
ENSMUST00000150799 42.949±0.00 47.599±0.00 40.426±18.33

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00099J CIL_00099J_0002 VISTA 16:18285741-18886132
CIL_0008BW CIL_0008BW_0002 VISTA 16:18293232-18893684
CIL_0005F0 CIL_0005F0_0002 CGP 16:18836584-18956247

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000263208 HIRA-001 protein_coding Homo_sapiens 0 451
ENST00000340170 HIRA-002 protein_coding Homo_sapiens 0 265
ENST00000509549 C22orf39-003 nonsense_mediated_decay Homo_sapiens 0 451

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