C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: GCN1 general control of amino-acid synthesis 1-like 1 (yeast)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000151030 Gcn1l1-010 ENSMUSG00000041638 10090 + 5:115582268-115622653 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000151030
Transcript ID Adrenal Brain Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000151030 4.580±1.10 10.327±0.00 3.827±0.73 2.728±0.36 2.233±0.12 1.450±0.00 2.860±0.00 1.119±0.00 6.914±1.87 7.337±2.02 8.741±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007ZA CIL_0007ZA_0002 VISTA 5:114966986-115567561
CIL_0009CQ CIL_0009CQ_0002 VISTA 5:115188390-115791906
CIL_0004YR CIL_0004YR_0002 CGP 5:115565254-115647736

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000300648 GCN1L1-001 protein_coding Homo_sapiens 0 4514
ENST00000547369 GCN1L1-004 retained_intron Homo_sapiens 0 577
ENST00000548132 GCN1L1-006 retained_intron Homo_sapiens 0 316
ENST00000549815 GCN1L1-008 retained_intron Homo_sapiens 0 394
ENST00000550471 GCN1L1-003 retained_intron Homo_sapiens 0 878
ENST00000551920 GCN1L1-005 retained_intron Homo_sapiens 0 479

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