C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: ring finger protein 10
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000151085 Rnf10-005 ENSMUSG00000041740 10090 - 5:115251314-115260226 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastENSMUST00000151085
Transcript ID Breast
ENSMUST00000151085 53.654±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007ZA CIL_0007ZA_0002 VISTA 5:114966986-115567561
CIL_0009CQ CIL_0009CQ_0002 VISTA 5:115188390-115791906

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000325954 RNF10-001 protein_coding Homo_sapiens 0 641
ENST00000413266 RNF10-002 protein_coding Homo_sapiens 0 641
ENST00000535417 RNF10-025 retained_intron Homo_sapiens 0 268
ENST00000536869 RNF10-026 nonsense_mediated_decay Homo_sapiens 0 359
ENST00000537997 RNF10-022 protein_coding Homo_sapiens 0 241
ENST00000538796 RNF10-023 nonsense_mediated_decay Homo_sapiens 0 641
ENST00000542207 RNF10-028 protein_coding Homo_sapiens 0 278
ENST00000543578 RNF10-027 processed_transcript Homo_sapiens 0 547
ENST00000551139 RNF10-030 processed_transcript Homo_sapiens 0 283

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