C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transmembrane protein 209
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000151187 Tmem209-002 ENSMUSG00000029782 10090 - 6:30479053-30509704 nonsense_mediated_decay

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastColonHeartKidneyLiverLungENSMUST00000151187
Transcript ID Adrenal Breast Colon Heart Kidney Liver Lung
ENSMUST00000151187 0.808±0.00 1.431±0.53 0.542±0.13 0.647±0.01 0.512±0.18 1.463±0.31 0.969±0.20

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008PP CIL_0008PP_0002 VISTA 6:30335908-30937352
CIL_0005Y2 CIL_0005Y2_0002 CGP 6:30401868-30509783
CIL_000273 CIL_000273_0002 CGP 6:30479053-30520254

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000397622 TMEM209-001 protein_coding Homo_sapiens 0 1897
ENST00000462753 TMEM209-004 protein_coding Homo_sapiens 0 1897
ENST00000471985 TMEM209-002 protein_coding Homo_sapiens 0 355
ENST00000473456 TMEM209-008 protein_coding Homo_sapiens 0 1203

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