C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | active BCR-related gene | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000151526  |
Abr-004 |
ENSMUSG00000017631 |
10090 | - |
11:76464238-76493929  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_00012J | CIL_00012J_0002 | CGP | 11:76406952-76622314 |
| CIL_0001Q6 | CIL_0001Q6_0002 | CGP | 11:76416734-76673676 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005089 | IEA | Rho guanyl-nucleotide exchange factor activity |
| GO:0005096 | TAS | GTPase activator activity |
| GO:0005829 | IDA | cytosol |
| GO:0005886 | IDA | plasma membrane |
| GO:0007420 | IGI | brain development |
| GO:0030036 | IGI | actin cytoskeleton organization |
| GO:0030336 | IGI | negative regulation of cell migration |
| GO:0030675 | IDA | Rac GTPase activator activity |
| GO:0032496 | IMP | response to lipopolysaccharide |
| GO:0032855 | IDA | positive regulation of Rac GTPase activity |
| GO:0042472 | IGI | inner ear morphogenesis |
| GO:0043314 | IGI | negative regulation of neutrophil degranulation |
| GO:0043547 | TAS | positive regulation of GTPase activity |
| GO:0050728 | IMP | negative regulation of inflammatory response |
| GO:0050766 | IGI | positive regulation of phagocytosis |
| GO:0050885 | IGI | neuromuscular process controlling balance |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSDART00000062073
|
BCR (1 of 2)-201 | protein_coding | Danio_rerio | 3e-32 | 143 |
|
ENSDART00000137009
|
BCR (1 of 2)-001 | protein_coding | Danio_rerio | 8e-28 | 128 |
|
ENST00000291107
|
ABR-003 | protein_coding | Homo_sapiens | 0 | 725 |
|
ENST00000302538
|
ABR-001 | protein_coding | Homo_sapiens | 0 | 723 |
|
ENST00000544583
|
ABR-004 | protein_coding | Homo_sapiens | 0 | 723 |
|
ENST00000570441
|
ABR-030 | protein_coding | Homo_sapiens | 0 | 723 |
|
ENST00000570525
|
ABR-031 | protein_coding | Homo_sapiens | 0 | 217 |
|
ENST00000573325
|
ABR-028 | retained_intron | Homo_sapiens | 0 | 337 |
|
ENST00000573667
|
ABR-027 | retained_intron | Homo_sapiens | 0 | 318 |
|
ENST00000574139
|
ABR-034 | protein_coding | Homo_sapiens | 0 | 405 |
|
ENST00000574266
|
ABR-032 | protein_coding | Homo_sapiens | 0 | 209 |
|
ENST00000574437
|
ABR-002 | protein_coding | Homo_sapiens | 0 | 723 |
|
ENST00000575934
|
ABR-029 | protein_coding | Homo_sapiens | 0 | 449 |
|
ENST00000576964
|
ABR-020 | processed_transcript | Homo_sapiens | 0 | 270 |
|
ENST00000611021
|
ABR-204 | protein_coding | Homo_sapiens | 0 | 725 |
|
ENST00000612118
|
ABR-205 | protein_coding | Homo_sapiens | 0 | 723 |
|
ENST00000613981
|
ABR-202 | protein_coding | Homo_sapiens | 0 | 725 |
|
ENST00000620619
|
ABR-208 | protein_coding | Homo_sapiens | 0 | 723 |
