C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: breakpoint cluster region
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000137009 BCR (1 of 2)-001 ENSDARG00000042329 7955 + 8:31349212-31441693 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; LiverENSDART00000137009
Transcript ID Liver
ENSDART00000137009 1.345±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001E0 CIL_0001E0_0001 CGP 8:31349212-31509755

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004674 IEA protein serine/threonine kinase activity
GO:0005085 IEA guanyl-nucleotide exchange factor activity
GO:0005089 IEA Rho guanyl-nucleotide exchange factor activity
GO:0005096 IEA GTPase activator activity
GO:0005515 IEA protein binding
GO:0005622 IEA intracellular
GO:0006468 IEA protein phosphorylation
GO:0007165 IEA signal transduction
GO:0035023 IEA regulation of Rho protein signal transduction
GO:0035556 IEA intracellular signal transduction

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000072740 Abr-001 protein_coding Mus_musculus 9.94922e-44 183
ENSMUST00000094012 Abr-002 protein_coding Mus_musculus 9.94922e-44 183
ENSMUST00000108407 Abr-201 protein_coding Mus_musculus 9.94922e-44 183
ENSMUST00000108408 Abr-003 protein_coding Mus_musculus 7.9874e-44 183
ENSMUST00000141442 Abr-010 retained_intron Mus_musculus 5.04467e-44 183
ENSMUST00000151526 Abr-004 protein_coding Mus_musculus 8e-28 128
ENST00000291107 ABR-003 protein_coding Homo_sapiens 0 228
ENST00000302538 ABR-001 protein_coding Homo_sapiens 0 228
ENST00000536794 ABR-026 protein_coding Homo_sapiens 0 228
ENST00000544583 ABR-004 protein_coding Homo_sapiens 0 228
ENST00000572152 ABR-008 nonsense_mediated_decay Homo_sapiens 0.000000001 68
ENST00000574437 ABR-002 protein_coding Homo_sapiens 0 228
ENST00000574875 ABR-021 retained_intron Homo_sapiens 0.0000000005 68
ENST00000575770 ABR-023 processed_transcript Homo_sapiens 2e-23 113
ENST00000611021 ABR-204 protein_coding Homo_sapiens 0 228
ENST00000612118 ABR-205 protein_coding Homo_sapiens 0 228
ENST00000613981 ABR-202 protein_coding Homo_sapiens 0 228
ENST00000619569 ABR-207 protein_coding Homo_sapiens 0 228
ENST00000620170 ABR-203 protein_coding Homo_sapiens 0 228
ENST00000620619 ABR-208 protein_coding Homo_sapiens 0 228

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