C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00012J_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000177370-ENSG00000159842 CGP 9606 17:997117-1229021
GeneTranscriptPositionBiotype
ENSG00000159842 (ABR)
active BCR-related 		ENST00000291107 (ABR-003) 1005908-1109100 protein_coding
ENST00000302538 (ABR-001) 1003518-1179874 protein_coding
ENST00000536794 (ABR-026) 1006080-1079146 protein_coding
ENST00000543210 (ABR-005) 1006061-1031838 protein_coding
ENST00000544583 (ABR-004) 1003527-1187322 protein_coding
ENST00000570441 (ABR-030) 1072733-1115436 protein_coding
ENST00000570525 (ABR-031) 1091792-1126545 protein_coding
ENST00000570688 (ABR-011) 1007269-1010213 retained_intron
ENST00000571022 (ABR-019) 1009738-1039597 processed_transcript
ENST00000571120 (ABR-018) 1009709-1013194 processed_transcript
ENST00000571306 (ABR-037) 1153813-1154619 processed_transcript
ENST00000571383 (ABR-017) 1009716-1013146 processed_transcript
ENST00000571543 (ABR-033) 1228144-1229021 processed_transcript
ENST00000571797 (ABR-013) 1005735-1011920 protein_coding
ENST00000571945 (ABR-025) 1067117-1079122 protein_coding
ENST00000572152 (ABR-008) 1010785-1050568 nonsense_mediated_decay
ENST00000572441 (ABR-014) 1005010-1031802 protein_coding
ENST00000572585 (ABR-006) 1003527-1012589 retained_intron
ENST00000572650 (ABR-010) 1007238-1010796 retained_intron
ENST00000573325 (ABR-028) 1083269-1091776 retained_intron
ENST00000573559 (ABR-012) 1006118-1011388 protein_coding
ENST00000573667 (ABR-027) 1070038-1083771 retained_intron
ENST00000573895 (ABR-022) 1055283-1058047 processed_transcript
ENST00000574048 (ABR-036) 1153810-1154952 processed_transcript
ENST00000574139 (ABR-034) 1091669-1229004 protein_coding
ENST00000574257 (ABR-009) 1012262-1050115 retained_intron
ENST00000574266 (ABR-032) 1091799-1179784 protein_coding
ENST00000574437 (ABR-002) 1005791-1125755 protein_coding
ENST00000574544 (ABR-024) 1050554-1069983 protein_coding
ENST00000574632 (ABR-035) 1125324-1154808 processed_transcript
ENST00000574875 (ABR-021) 1049980-1050573 retained_intron
ENST00000575770 (ABR-023) 1050050-1058047 processed_transcript
ENST00000575934 (ABR-029) 1083522-1229004 protein_coding
ENST00000576668 (ABR-016) 1012396-1031818 retained_intron
ENST00000576964 (ABR-020) 1050094-1083590 processed_transcript
ENST00000577052 (ABR-015) 1011576-1031818 processed_transcript
ENSG00000177370 (TIMM22)
translocase of inner mitochondrial membrane 22 homolog (yeast) 		ENST00000327158 (TIMM22-001) 997117-1003671 protein_coding
ENSG00000235361 (AC016292.1)
 ENST00000438344 (AC016292.1-001) 1181893-1185086 antisense
ENSG00000275997 (RP11-216P6.2)
 ENST00000618967 (RP11-216P6.2-001) 1155966-1156175 processed_pseudogene
ENSG00000278794 (Metazoa_SRP)
Metazoan signal recognition particle RNA 		ENST00000620071 (Metazoa_SRP.1-496) 1101007-1101273 misc_RNA

Homo sapiens Ensembl (GRCh38)

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CIL_00012J_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000020843-ENSMUSG00000017631 CGP 10090 11:76406952-76622314
GeneTranscriptPositionBiotype
ENSMUSG00000017631 (Abr)
active BCR-related gene 		ENSMUST00000065028 (Abr-006) 76416751-76468465 protein_coding
ENSMUST00000072740 (Abr-001) 76416734-76571535 protein_coding
ENSMUST00000094012 (Abr-002) 76416734-76509419 protein_coding
ENSMUST00000108407 (Abr-201) 76416735-76508995 protein_coding
ENSMUST00000108408 (Abr-003) 76419104-76495456 protein_coding
ENSMUST00000130364 (Abr-007) 76454544-76468298 nonsense_mediated_decay
ENSMUST00000131059 (Abr-009) 76423048-76437220 processed_transcript
ENSMUST00000137261 (Abr-005) 76485743-76494984 processed_transcript
ENSMUST00000141442 (Abr-010) 76458474-76495005 retained_intron
ENSMUST00000151526 (Abr-004) 76464238-76493929 protein_coding
ENSMUST00000155035 (Abr-008) 76479057-76622314 protein_coding
ENSMUST00000176024 (Abr-012) 76479113-76613395 protein_coding
ENSMUST00000176179 (Abr-011) 76479003-76577727 protein_coding
ENSMUSG00000020843 (Timm22)
translocase of inner mitochondrial membrane 22 		ENSMUST00000021203 (Timm22-001) 76407143-76416292 protein_coding
ENSMUST00000120699 (Timm22-003) 76406952-76414329 protein_coding
ENSMUST00000152183 (Timm22-002) 76407191-76414082 protein_coding
ENSMUST00000164102 (Timm22-004) 76407205-76409696 nonsense_mediated_decay
ENSMUSG00000024205 (Rpl36-ps2)
ribosomal protein L36, pseudogene 2 		ENSMUST00000136893 (Rpl36-ps2-001) 76601319-76601629 processed_pseudogene
ENSMUSG00000080763 (Gm12341)
predicted gene 12341 		ENSMUST00000119724 (Gm12341-001) 76514069-76514571 processed_pseudogene

Mus musculus Ensembl (GRCm38)

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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00012J_0001ENSG00000159842ENST00000291107ENST00000302538ENST00000536794ENST00000544583ENST00000572585ENST00000574139ENST00000574257ENST00000575770ENSG00000177370ENST00000327158ENSG00000235361ENST00000438344ENSG00000275997ENST00000618967ENSG00000278794ENST00000620071CIL_00012J_0002ENSMUSG00000017631ENSMUST00000065028ENSMUST00000072740ENSMUST00000108407ENSMUST00000108408ENSMUST00000141442ENSMUSG00000020843ENSMUST00000021203ENSMUST00000120699ENSMUST00000152183ENSMUSG00000024205ENSMUST00000136893ENSMUSG00000080763ENSMUST00000119724
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000159842 ENST00000291107 N/A N/A N/A N/A 2.150±0.00 8.377±0.00 N/A N/A 2.753±0.00 2.184±0.00 N/A N/A N/A N/A
ENST00000302538 6.484±0.00 7.390±0.00 1.501±0.00 33.224±17.26 3.526±0.00 4.803±0.57 12.364±0.00 N/A 1.449±0.35 5.268±0.00 N/A 9.894±4.81 3.957±0.62 5.507±0.86
ENST00000536794 N/A N/A 0.961±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000543210 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000544583 N/A N/A N/A 10.297±0.00 2.281±0.00 N/A N/A 0.930±0.00 0.738±0.00 1.759±0.00 N/A N/A N/A N/A
ENST00000570441 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000570525 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000570688 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000571022 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000571120 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000571306 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000571383 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000571543 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000571797 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000571945 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000572152 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000572441 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000572585 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 12.650±2.30 N/A N/A
ENST00000572650 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000573325 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000573559 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000573667 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000573895 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000574048 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000574139 N/A N/A N/A N/A N/A 30.471±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000574257 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 41.910±0.00 N/A 17.568±0.00
ENST00000574266 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000574437 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000574544 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000574632 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000574875 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000575770 N/A N/A N/A N/A N/A 43.746±0.00 N/A N/A N/A 13.100±0.00 N/A 20.063±0.00 N/A N/A
ENST00000575934 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000576668 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000576964 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000577052 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000177370 ENST00000327158 5.249±0.00 9.560±0.00 1.463±0.00 N/A 4.073±1.85 5.894±0.00 5.199±2.60 4.018±2.59 2.388±0.25 2.985±0.74 2.701±0.52 7.376±1.94 10.708±2.09 7.616±0.06
ENSG00000235361 ENST00000438344 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.260±0.00 N/A 0.288±0.00
ENSG00000275997 ENST00000618967 N/A 0.231±0.00 N/A N/A N/A N/A 0.108±0.00 N/A N/A N/A N/A 0.362±0.00 N/A N/A
ENSG00000278794 ENST00000620071 0.137±0.00 1.394±0.00 N/A 0.474±0.00 0.721±0.00 0.200±0.00 0.066±0.00 0.645±0.00 0.180±0.00 0.318±0.00 0.731±0.00 1.771±1.35 0.200±0.00 0.194±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000017631 ENSMUST00000065028 N/A 8.999±1.73 N/A 55.743±2.98 N/A N/A N/A N/A 0.470±0.00 N/A N/A 3.053±0.52 0.685±0.00 N/A
ENSMUST00000072740 3.500±0.84 14.637±4.36 N/A 12.837±5.92 N/A N/A N/A 1.758±0.30 N/A N/A N/A 4.084±0.87 N/A 0.608±0.18
ENSMUST00000094012 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000108407 4.390±2.97 N/A 5.881±0.72 38.538±29.72 2.734±0.75 12.244±2.98 2.908±0.28 4.688±0.79 0.863±0.51 7.158±0.99 0.956±0.16 8.562±4.78 6.303±6.42 2.082±0.48
ENSMUST00000108408 N/A N/A N/A 42.482±0.00 N/A N/A N/A N/A N/A N/A 1.085±0.00 13.206±0.00 5.444±5.27 0.746±0.00
ENSMUST00000130364 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000131059 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000137261 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000141442 N/A N/A N/A N/A 4.358±0.00 N/A N/A N/A N/A N/A N/A 7.891±1.34 N/A N/A
ENSMUST00000151526 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000155035 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000176024 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000176179 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000020843 ENSMUST00000021203 6.408±0.41 4.063±0.79 4.164±0.36 5.021±2.59 4.841±0.84 3.248±0.40 4.851±0.33 7.056±0.35 3.233±0.83 4.534±0.34 5.801±1.37 4.731±0.89 6.532±0.75 1.326±0.54
ENSMUST00000120699 N/A N/A 5.147±1.63 5.078±1.08 N/A 2.120±0.00 N/A 5.576±0.00 5.501±2.25 N/A 6.710±0.75 8.751±1.33 12.396±3.38 2.394±0.11
ENSMUST00000152183 N/A 21.946±8.36 N/A 17.201±0.00 6.573±2.05 6.456±1.45 N/A 8.367±0.00 3.767±1.14 7.014±0.04 N/A 11.920±3.00 38.891±0.00 8.732±5.12
ENSMUST00000164102 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000024205 ENSMUST00000136893 5.671±1.26 4.802±1.26 8.958±7.58 6.744±0.41 3.206±0.89 3.476±2.00 2.404±0.50 1.999±0.64 3.856±3.98 2.310±1.07 N/A 13.142±11.01 1.349±0.39 2.944±1.15
ENSMUSG00000080763 ENSMUST00000119724 0.083±0.00 0.147±0.00 0.055±0.01 0.056±0.05 0.476±0.00 0.294±0.11 N/A 0.080±0.00 N/A 0.094±0.00 N/A 0.432±0.12 0.156±0.00 0.086±0.00

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