C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: phospholipase C, gamma 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000151590 Plcg1-004 ENSMUSG00000016933 10090 + 2:160731300-160762502 nonsense_mediated_decay

Mus musculus EnsemblGRCm38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonKidneyLiverLungOvaryENSMUST00000151590
Transcript ID Adipose Adrenal Brain Breast Colon Kidney Liver Lung Ovary
ENSMUST00000151590 10.434±0.00 11.200±4.19 15.053±0.00 6.419±0.00 4.349±1.34 5.092±1.61 3.769±0.09 11.105±1.50 17.001±4.11

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008TO CIL_0008TO_0002 VISTA 2:160151305-160752587
CIL_0009AU CIL_0009AU_0002 VISTA 2:160192291-160794448
CIL_0007XA CIL_0007XA_0002 VISTA 2:160203620-160804635
CIL_0008MI CIL_0008MI_0002 VISTA 2:160213670-160814864
CIL_0008QO CIL_0008QO_0002 VISTA 2:160215694-160817266
CIL_0009AV CIL_0009AV_0002 VISTA 2:160278530-160880585
CIL_0004EC CIL_0004EC_0002 CGP 2:160645888-160775760
CIL_0002I4 CIL_0002I4_0002 CGP 2:160731300-160872998

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001701 IMP in utero embryonic development
GO:0004435 IEA phosphatidylinositol phospholipase C activity
GO:0005509 IEA calcium ion binding
GO:0005737 ISO cytoplasm
GO:0005911 IDA cell-cell junction
GO:0008152 IEA metabolic process
GO:0016042 IEA lipid catabolic process
GO:0035254 IPI glutamate receptor binding
GO:0035556 IEA intracellular signal transduction
GO:0050852 IDA T cell receptor signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000244007 PLCG1-013 protein_coding Homo_sapiens 0 5408
ENST00000373271 PLCG1-005 protein_coding Homo_sapiens 0 5421
ENST00000461641 PLCG1-012 retained_intron Homo_sapiens 0 1190
ENST00000465571 PLCG1-003 retained_intron Homo_sapiens 0 678
ENST00000470528 PLCG1-008 retained_intron Homo_sapiens 0 440
ENST00000473632 PLCG1-002 retained_intron Homo_sapiens 0 477
ENST00000477870 PLCG1-004 retained_intron Homo_sapiens 0 649
ENST00000483175 PLCG1-011 retained_intron Homo_sapiens 0 586
ENST00000483646 PLCG1-007 processed_transcript Homo_sapiens 0 569
ENST00000490253 PLCG1-006 retained_intron Homo_sapiens 0 481
ENST00000492148 PLCG1-001 retained_intron Homo_sapiens 0 488
ENST00000599785 PLCG1-014 nonsense_mediated_decay Homo_sapiens 0 979
ENST00000607954 PLCG1-016 nonsense_mediated_decay Homo_sapiens 0 778
ENST00000608689 PLCG1-015 processed_transcript Homo_sapiens 0 1140
ENST00000608885 PLCG1-019 nonsense_mediated_decay Homo_sapiens 0 832
ENST00000609257 PLCG1-018 nonsense_mediated_decay Homo_sapiens 0 896
ENST00000609821 PLCG1-017 processed_transcript Homo_sapiens 0 723
ENST00000612731 PLCG1-021 processed_transcript Homo_sapiens 0 457
ENST00000617873 PLCG1-022 processed_transcript Homo_sapiens 0 608
ENST00000619272 PLCG1-023 processed_transcript Homo_sapiens 3e-24 115

Loading