C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: phospholipase C, gamma 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000244007 PLCG1-013 ENSG00000124181 9606 + 20:41136960-41175721 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000244007
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000244007 12.376±0.00 20.541±0.00 9.490±4.33 8.233±1.86 8.260±4.83 5.412±3.16 9.886±0.00 2.644±0.00 11.772±4.11 4.888±3.48 18.427±9.11 17.431±3.43 27.520±5.19

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007XA CIL_0007XA_0001 VISTA 20:40544008-41145062
CIL_0008MI CIL_0008MI_0001 VISTA 20:40554707-41155953
CIL_0008QO CIL_0008QO_0001 VISTA 20:40556740-41158918
CIL_0009AV CIL_0009AV_0001 VISTA 20:40645674-41248255
CIL_0004EC CIL_0004EC_0001 CGP 20:41028818-41196787
CIL_0002I4 CIL_0002I4_0001 CGP 20:41136960-41317672

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000186 TAS activation of MAPKK activity
GO:0001701 IEA in utero embryonic development
GO:0001726 IDA ruffle
GO:0004435 IDA:IEA phosphatidylinositol phospholipase C activity
GO:0004629 TAS phospholipase C activity
GO:0004871 IEA signal transducer activity
GO:0005057 NAS receptor signaling protein activity
GO:0005168 IPI neurotrophin TRKA receptor binding
GO:0005509 IEA calcium ion binding
GO:0005515 IPI:IEA protein binding
GO:0005737 IDA cytoplasm
GO:0005829 IDA cytosol
GO:0005886 IDA plasma membrane
GO:0005911 IEA cell-cell junction
GO:0006629 IEA lipid metabolic process
GO:0007165 NAS:IEA signal transduction
GO:0007173 IMP epidermal growth factor receptor signaling pathway
GO:0007202 TAS activation of phospholipase C activity
GO:0007411 TAS axon guidance
GO:0007596 TAS blood coagulation
GO:0008081 IEA phosphoric diester hydrolase activity
GO:0008180 IDA COP9 signalosome
GO:0008543 TAS fibroblast growth factor receptor signaling pathway
GO:0009395 IEA phospholipid catabolic process
GO:0010634 IMP positive regulation of epithelial cell migration
GO:0016032 IEA viral process
GO:0016477 IMP cell migration
GO:0019221 TAS cytokine-mediated signaling pathway
GO:0019722 IMP calcium-mediated signaling
GO:0019901 IPI protein kinase binding
GO:0030027 IDA lamellipodium
GO:0030971 IEA receptor tyrosine kinase binding
GO:0035254 IEA glutamate receptor binding
GO:0035556 IEA intracellular signal transduction
GO:0038095 TAS Fc-epsilon receptor signaling pathway
GO:0038096 TAS Fc-gamma receptor signaling pathway involved in phagocytosis
GO:0042995 IDA cell projection
GO:0043536 IDA positive regulation of blood vessel endothelial cell migration
GO:0043647 TAS inositol phosphate metabolic process
GO:0044281 TAS small molecule metabolic process
GO:0045087 TAS innate immune response
GO:0045766 IDA positive regulation of angiogenesis
GO:0048011 TAS neurotrophin TRK receptor signaling pathway
GO:0050852 TAS T cell receptor signaling pathway
GO:0050900 TAS leukocyte migration
GO:0051281 IMP positive regulation of release of sequestered calcium ion into cytosol
GO:0071364 IDA cellular response to epidermal growth factor stimulus

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000109462 Plcg1-003 protein_coding Mus_musculus 0 5742
ENSMUST00000151590 Plcg1-004 nonsense_mediated_decay Mus_musculus 0 5408
ENSMUST00000017077 Plcg1-008 processed_transcript Mus_musculus 0 5110
ENSMUST00000103115 Plcg1-001 protein_coding Mus_musculus 0 5016
ENSMUST00000173791 Plcg1-009 retained_intron Mus_musculus 0 2863
ENSMUST00000173335 Plcg1-010 retained_intron Mus_musculus 0 2056
ENSDART00000022045 plcg1-201 protein_coding Danio_rerio 0 1517
ENSDART00000135781 plcg1-001 protein_coding Danio_rerio 0 1517
ENSMUST00000124652 Plcg1-007 processed_transcript Mus_musculus 0 593
ENSMUST00000143997 Plcg1-002 protein_coding Mus_musculus 0 555
ENSMUST00000173061 Plcg1-012 retained_intron Mus_musculus 0 549
ENSMUST00000174885 Plcg1-011 protein_coding Mus_musculus 0 431
ENSMUST00000129568 Plcg1-005 retained_intron Mus_musculus 0 381
ENSMUST00000147254 Plcg1-006 retained_intron Mus_musculus 0 292
ENSMUST00000133937 Zhx3-004 processed_transcript Mus_musculus 2e-32 147

Loading