C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: SNF related kinase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000151872 Snrk-007 ENSMUSG00000038145 10090 + 9:122163869-122166490 retained_intron

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003F0 CIL_0003F0_0002 CGP 9:121981606-122169702
CIL_0003F1 CIL_0003F1_0002 CGP 9:122117283-122294374

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000296088 SNRK-004 protein_coding Homo_sapiens 0 472
ENST00000429705 SNRK-002 protein_coding Homo_sapiens 0 472
ENST00000437827 SNRK-003 protein_coding Homo_sapiens 0 472
ENST00000454177 SNRK-001 protein_coding Homo_sapiens 0 472
ENST00000468628 SNRK-008 processed_transcript Homo_sapiens 4e-39 165
ENST00000481892 SNRK-007 retained_intron Homo_sapiens 0 488
ENST00000520549 IRGM-002 nonsense_mediated_decay Homo_sapiens 4e-24 115

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