C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: proteasome (prosome, macropain) subunit, beta type 7
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000151981 Psmb7-002 ENSMUSG00000026750 10090 - 2:38613378-38643889 processed_transcript

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastHeartKidneyLiverLungOvaryTestisENSMUST00000151981
Transcript ID Adipose Adrenal Breast Heart Kidney Liver Lung Ovary Testis
ENSMUST00000151981 41.098±7.78 44.865±8.69 54.397±24.01 41.626±4.43 40.306±5.11 66.066±12.92 25.179±4.14 47.349±4.70 28.794±8.76

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007MV CIL_0007MV_0002 UCNEbase 2:38111928-38614796
CIL_0008N3 CIL_0008N3_0002 VISTA 2:38235055-38837083
CIL_00098L CIL_00098L_0002 VISTA 2:38294702-38895720
CIL_0006WH CIL_0006WH_0002 CGP 2:38339281-38588041
CIL_0006WG CIL_0006WG_0002 CGP 2:38511643-38644087

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000259457 PSMB7-001 protein_coding Homo_sapiens 0 789
ENST00000441097 PSMB7-003 protein_coding Homo_sapiens 0 689
ENST00000466951 PSMB7-006 processed_transcript Homo_sapiens 0 392
ENST00000474081 PSMB7-004 processed_transcript Homo_sapiens 4e-19 99
ENST00000478817 PSMB7-005 processed_transcript Homo_sapiens 8e-20 100
ENST00000498485 PSMB7-002 processed_transcript Homo_sapiens 0 453
ENST00000556349 PSMB7P1-001 unitary_pseudogene Homo_sapiens 0 204

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