C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: proteasome (prosome, macropain) 26S subunit, non-ATPase, 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000152102 Psmd3-005 ENSMUSG00000017221 10090 + 11:98682591-98695049 retained_intron

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007WH CIL_0007WH_0002 VISTA 11:98091902-98695006
CIL_00098Y CIL_00098Y_0002 VISTA 11:98447152-99051430
CIL_0002PR CIL_0002PR_0002 CGP 11:98664351-98695979
CIL_0002PY CIL_0002PY_0002 CGP 11:98682554-98703629

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000187762 TMEM38A-001 protein_coding Homo_sapiens 0.000000000003 79
ENST00000264639 PSMD3-001 protein_coding Homo_sapiens 0 1214
ENST00000415039 PSMD3-003 nonsense_mediated_decay Homo_sapiens 0 640
ENST00000540504 PSMD3-005 protein_coding Homo_sapiens 0 383
ENST00000580980 PSMD3-004 retained_intron Homo_sapiens 0 525

Loading