C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: proteasome (prosome, macropain) 26S subunit, non-ATPase, 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000017221 Psmd3 10090 + 11:98682554-98695979 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000017365 Psmd3-001 98682554-98695979 protein_coding
  ENSMUST00000123676 Psmd3-004 98687787-98693840 protein_coding
  ENSMUST00000142790 Psmd3-006 98690461-98691469 retained_intron
  ENSMUST00000149489 Psmd3-002 98682565-98692517 retained_intron
  ENSMUST00000152102 Psmd3-005 98682591-98695049 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000017365ENSMUST00000123676ENSMUST00000149489
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000017365 74.753±17.75 78.602±7.55 52.653±6.29 68.280±17.89 68.857±20.51 65.930±4.69 51.134±9.28 122.448±15.69 66.847±11.71 65.417±1.77 51.100±1.07 96.201±21.38 75.248±25.40 30.191±9.80
ENSMUST00000123676 N/A N/A N/A N/A 34.044±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000149489 N/A N/A N/A N/A 3.672±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007WH CIL_0007WH_0002 VISTA 11:98091902-98695006
CIL_00098Y CIL_00098Y_0002 VISTA 11:98447152-99051430
CIL_0002PR CIL_0002PR_0002 CGP 11:98664351-98695979
CIL_0002PY CIL_0002PY_0002 CGP 11:98682554-98703629

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0005838 IDA proteasome regulatory particle
GO:0016020 IEA membrane
GO:0022624 IDA proteasome accessory complex
GO:0030234 IEA enzyme regulator activity
GO:0042176 IEA regulation of protein catabolic process
GO:0050790 IEA regulation of catalytic activity
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000018124 psmd3 proteasome (prosome, macropain) 26S subunit, non-ATPase, 3 protein_coding Danio_rerio
ENSG00000108344 PSMD3 proteasome (prosome, macropain) 26S subunit, non-ATPase, 3 protein_coding Homo_sapiens

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