C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: retinol dehydrogenase 10 (all-trans)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000152626 Rdh10-002 ENSMUSG00000025921 10090 + 1:16130502-16132547 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; LiverMuscleOvaryENSMUST00000152626
Transcript ID Liver Muscle Ovary
ENSMUST00000152626 0.628±0.00 0.186±0.08 1.046±0.19

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005C3 CIL_0005C3_0003 CGP 1:16101295-16133734
CIL_0001D6 CIL_0001D6_0002 CGP 1:16105774-16520112

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000240285 RDH10-001 protein_coding Homo_sapiens 0 442
ENST00000519380 RDH10-002 protein_coding Homo_sapiens 0 385
ENST00000521013 RDH10-005 retained_intron Homo_sapiens 0 429

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